Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Gm16387-201ENSMUST00000180990 2632 ntBASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Gm8731-201ENSMUST00000118088 412 ntBASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Mir1896-201ENSMUST00000122641 81 ntBASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Gm43058-201ENSMUST00000197645 625 ntBASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Gm4482-201ENSMUST00000200876 742 ntBASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Gm17825-201ENSMUST00000206836 794 ntBASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nhlrc3Q8CCH2 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Gm15953-201ENSMUST00000117656 1732 ntBASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Gm24891-201ENSMUST00000104391 136 ntBASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Gm12407-201ENSMUST00000180219 324 ntBASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Gm9540-201ENSMUST00000188230 478 ntBASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Gm5733-201ENSMUST00000190232 939 ntBASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Gm45331-201ENSMUST00000209868 554 ntBASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Gm9899-201ENSMUST00000065519 555 ntBASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC9.34□□□□□ -0.91
Nhlrc3Q8CCH2 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms