Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 Gm29067-201ENSMUST00000190821 470 ntBASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 Gm45331-201ENSMUST00000209868 554 ntBASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 CT009713.8-202ENSMUST00000224732 385 ntBASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 CT025602.2-201ENSMUST00000226553 772 ntBASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lysmd4Q8CC84 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lysmd4Q8CC84 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Lysmd4Q8CC84 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lysmd4Q8CC84 Gm44888-201ENSMUST00000209119 2541 ntBASIC9.9□□□□□ -0.83
Lysmd4Q8CC84 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lysmd4Q8CC84 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lysmd4Q8CC84 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Lysmd4Q8CC84 Gm5159-201ENSMUST00000212733 1652 ntBASIC9.9□□□□□ -0.83
Lysmd4Q8CC84 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lysmd4Q8CC84 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Gm12196-201ENSMUST00000120954 262 ntBASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Gm24749-201ENSMUST00000157838 343 ntBASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Gm8100-201ENSMUST00000182906 988 ntBASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lysmd4Q8CC84 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lysmd4Q8CC84 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.88□□□□□ -0.83
Lysmd4Q8CC84 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Lysmd4Q8CC84 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC9.88□□□□□ -0.83
Lysmd4Q8CC84 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lysmd4Q8CC84 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lysmd4Q8CC84 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lysmd4Q8CC84 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lysmd4Q8CC84 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lysmd4Q8CC84 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC9.88□□□□□ -0.83
Lysmd4Q8CC84 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lysmd4Q8CC84 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.88□□□□□ -0.83
Lysmd4Q8CC84 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Lysmd4Q8CC84 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lysmd4Q8CC84 Gm8111-201ENSMUST00000117659 987 ntBASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms