Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Capsl-202ENSMUST00000226688 739 ntBASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Gm19027-201ENSMUST00000187291 1355 ntBASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Gm12136-201ENSMUST00000120460 1209 ntBASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Gm24248-201ENSMUST00000157321 322 ntBASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Mir8091-201ENSMUST00000183602 139 ntBASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Gm29155-201ENSMUST00000185910 269 ntBASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Gm19587-201ENSMUST00000191395 545 ntBASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 AC134793.1-202ENSMUST00000227444 803 ntBASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Gm33366-201ENSMUST00000195583 3827 ntBASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps54Q5SPW0 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Smok4a-201ENSMUST00000074512 1455 ntBASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Gm16397-201ENSMUST00000122201 494 ntBASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Gm5210-201ENSMUST00000182150 1010 ntBASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Gm28032-201ENSMUST00000184104 96 ntBASIC13.24□□□□□ -0.29
Vps54Q5SPW0 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Gm44216-201ENSMUST00000203942 157 ntBASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 AC154461.3-201ENSMUST00000224831 573 ntBASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps54Q5SPW0 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps54Q5SPW0 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms