Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna5Q2MKA5 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna5Q2MKA5 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC13.14□□□□□ -0.31
Chrna5Q2MKA5 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna5Q2MKA5 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna5Q2MKA5 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Chrna5Q2MKA5 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna5Q2MKA5 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Chrna5Q2MKA5 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Chrna5Q2MKA5 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna5Q2MKA5 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Gm13608-201ENSMUST00000121807 1406 ntBASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Gm42815-201ENSMUST00000198787 1470 ntBASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Gm27826-201ENSMUST00000175282 255 ntBASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Gm20091-201ENSMUST00000179683 189 ntBASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Gm27833-201ENSMUST00000184285 124 ntBASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Gm37858-201ENSMUST00000192759 1231 ntBASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 AC124613.1-201ENSMUST00000198711 88 ntBASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 AC133517.1-201ENSMUST00000225825 594 ntBASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Matn2-203ENSMUST00000226766 3252 ntBASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Chrna5Q2MKA5 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Gm13192-201ENSMUST00000101199 208 ntBASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Gm10443-201ENSMUST00000119024 210 ntBASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Gm12136-201ENSMUST00000120460 1209 ntBASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Gm14148-201ENSMUST00000122433 1008 ntBASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Gm4775-201ENSMUST00000169588 402 ntBASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Gm43097-201ENSMUST00000196867 151 ntBASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Gm20568-201ENSMUST00000197129 208 ntBASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Gm3791-201ENSMUST00000220790 768 ntBASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Gm22341-201ENSMUST00000083775 129 ntBASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Gm37058-201ENSMUST00000193393 1644 ntBASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna5Q2MKA5 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chrna5Q2MKA5 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms