Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm7672-201ENSMUST00000180915 872 ntBASIC17.81■□□□□ 0.44
Cux2P70298 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cux2P70298 Gm28381-201ENSMUST00000188403 193 ntBASIC17.81■□□□□ 0.44
Cux2P70298 Gm29157-201ENSMUST00000188753 612 ntBASIC17.81■□□□□ 0.44
Cux2P70298 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Cux2P70298 Gm38004-201ENSMUST00000192972 357 ntBASIC17.81■□□□□ 0.44
Cux2P70298 Gm42875-201ENSMUST00000197674 1015 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cux2P70298 Olfr139-203ENSMUST00000206280 1059 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Cux2P70298 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC17.81■□□□□ 0.44
Cux2P70298 AC163351.1-201ENSMUST00000225539 737 ntBASIC17.81■□□□□ 0.44
Cux2P70298 Fibp-201ENSMUST00000025847 1215 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cux2P70298 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cux2P70298 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cux2P70298 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC17.81■□□□□ 0.44
Cux2P70298 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Cux2P70298 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cux2P70298 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cux2P70298 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cux2P70298 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cux2P70298 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cux2P70298 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cux2P70298 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cux2P70298 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cux2P70298 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cux2P70298 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cux2P70298 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cux2P70298 AC147366.2-201ENSMUST00000226859 2038 ntBASIC17.81■□□□□ 0.44
Cux2P70298 Gm44663-201ENSMUST00000206898 3150 ntBASIC17.81■□□□□ 0.44
Cux2P70298 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cux2P70298 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cux2P70298 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cux2P70298 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC17.81■□□□□ 0.44
Cux2P70298 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cux2P70298 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC17.81■□□□□ 0.44
Cux2P70298 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cux2P70298 Gm5543-201ENSMUST00000193329 1091 ntBASIC17.81■□□□□ 0.44
Cux2P70298 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC17.81■□□□□ 0.44
Cux2P70298 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC17.81■□□□□ 0.44
Cux2P70298 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC17.81■□□□□ 0.44
Cux2P70298 Zfp389-202ENSMUST00000224437 1234 ntBASIC17.81■□□□□ 0.44
Cux2P70298 Gm28653-202ENSMUST00000227082 521 ntBASIC17.81■□□□□ 0.44
Cux2P70298 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cux2P70298 1110017D15Rik-202ENSMUST00000095126 884 ntTSL 3 BASIC17.81■□□□□ 0.44
Cux2P70298 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cux2P70298 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cux2P70298 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC17.8■□□□□ 0.44
Cux2P70298 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cux2P70298 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC17.8■□□□□ 0.44
Cux2P70298 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cux2P70298 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cux2P70298 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cux2P70298 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cux2P70298 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cux2P70298 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cux2P70298 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cux2P70298 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cux2P70298 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cux2P70298 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cux2P70298 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cux2P70298 Krtap29-1-201ENSMUST00000105051 1029 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cux2P70298 Gm436-201ENSMUST00000105747 1224 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cux2P70298 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cux2P70298 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC17.8■□□□□ 0.44
Cux2P70298 Gm16518-201ENSMUST00000117960 508 ntBASIC17.8■□□□□ 0.44
Cux2P70298 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC17.8■□□□□ 0.44
Cux2P70298 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cux2P70298 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC17.8■□□□□ 0.44
Cux2P70298 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC17.8■□□□□ 0.44
Cux2P70298 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cux2P70298 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cux2P70298 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cux2P70298 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cux2P70298 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC17.8■□□□□ 0.44
Cux2P70298 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC17.8■□□□□ 0.44
Cux2P70298 AC129017.2-201ENSMUST00000226118 1284 ntBASIC17.8■□□□□ 0.44
Cux2P70298 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cux2P70298 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cux2P70298 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cux2P70298 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cux2P70298 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cux2P70298 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cux2P70298 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cux2P70298 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cux2P70298 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cux2P70298 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cux2P70298 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC17.79■□□□□ 0.44
Cux2P70298 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cux2P70298 Pde7a-203ENSMUST00000121951 382 ntTSL 3 BASIC17.79■□□□□ 0.44
Cux2P70298 Gm13071-201ENSMUST00000122237 376 ntBASIC17.79■□□□□ 0.44
Cux2P70298 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cux2P70298 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cux2P70298 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cux2P70298 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Cux2P70298 Gm24368-201ENSMUST00000175388 106 ntBASIC17.79■□□□□ 0.44
Cux2P70298 Gm17764-201ENSMUST00000185925 391 ntBASIC17.79■□□□□ 0.44
Cux2P70298 Gm8174-201ENSMUST00000064353 1001 ntBASIC17.79■□□□□ 0.44
Cux2P70298 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cux2P70298 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cux2P70298 Cog3-203ENSMUST00000227473 4197 ntBASIC17.79■□□□□ 0.44
Cux2P70298 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms