Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Atxn1P54254 Gm18010-201ENSMUST00000203553 202 ntBASIC11.07□□□□□ -0.64
Atxn1P54254 Gm5996-201ENSMUST00000211110 718 ntBASIC11.07□□□□□ -0.64
Atxn1P54254 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Atxn1P54254 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.07□□□□□ -0.64
Atxn1P54254 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Atxn1P54254 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.07□□□□□ -0.64
Atxn1P54254 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.07□□□□□ -0.64
Atxn1P54254 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Atxn1P54254 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Atxn1P54254 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.06□□□□□ -0.64
Atxn1P54254 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.06□□□□□ -0.64
Atxn1P54254 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.06□□□□□ -0.64
Atxn1P54254 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.06□□□□□ -0.64
Atxn1P54254 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.06□□□□□ -0.64
Atxn1P54254 Gm22937-201ENSMUST00000103954 131 ntBASIC11.06□□□□□ -0.64
Atxn1P54254 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.06□□□□□ -0.64
Atxn1P54254 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC11.06□□□□□ -0.64
Atxn1P54254 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 Gm38007-201ENSMUST00000192187 313 ntBASIC11.06□□□□□ -0.64
Atxn1P54254 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC11.06□□□□□ -0.64
Atxn1P54254 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Atxn1P54254 Gm42660-201ENSMUST00000197733 947 ntBASIC11.06□□□□□ -0.64
Atxn1P54254 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC11.06□□□□□ -0.64
Atxn1P54254 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11.06□□□□□ -0.64
Atxn1P54254 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Atxn1P54254 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.06□□□□□ -0.64
Atxn1P54254 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Atxn1P54254 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.06□□□□□ -0.64
Atxn1P54254 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.06□□□□□ -0.64
Atxn1P54254 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.06□□□□□ -0.64
Atxn1P54254 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atxn1P54254 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.06□□□□□ -0.64
Atxn1P54254 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Atxn1P54254 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Atxn1P54254 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.05□□□□□ -0.64
Atxn1P54254 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.05□□□□□ -0.64
Atxn1P54254 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.05□□□□□ -0.64
Atxn1P54254 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Atxn1P54254 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.05□□□□□ -0.64
Atxn1P54254 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC11.05□□□□□ -0.64
Atxn1P54254 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Atxn1P54254 Gm13192-201ENSMUST00000101199 208 ntBASIC11.05□□□□□ -0.64
Atxn1P54254 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Atxn1P54254 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC11.05□□□□□ -0.64
Atxn1P54254 Gm10443-201ENSMUST00000119024 210 ntBASIC11.05□□□□□ -0.64
Atxn1P54254 Gm8019-201ENSMUST00000119317 587 ntBASIC11.05□□□□□ -0.64
Atxn1P54254 Gm15136-201ENSMUST00000120552 533 ntBASIC11.05□□□□□ -0.64
Atxn1P54254 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.05□□□□□ -0.64
Atxn1P54254 Gm15549-201ENSMUST00000121595 622 ntBASIC11.05□□□□□ -0.64
Atxn1P54254 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.05□□□□□ -0.64
Atxn1P54254 Gm4943-201ENSMUST00000132879 424 ntBASIC11.05□□□□□ -0.64
Atxn1P54254 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Gm22388-201ENSMUST00000158194 248 ntBASIC11.05□□□□□ -0.64
Atxn1P54254 Gm24294-201ENSMUST00000158295 277 ntBASIC11.05□□□□□ -0.64
Atxn1P54254 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC11.05□□□□□ -0.64
Atxn1P54254 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms