Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm14633-201ENSMUST00000121152 470 ntBASIC12.85□□□□□ -0.35
Col1a1P11087 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC12.85□□□□□ -0.35
Col1a1P11087 Gm7211-201ENSMUST00000172692 1118 ntBASIC12.85□□□□□ -0.35
Col1a1P11087 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC12.85□□□□□ -0.35
Col1a1P11087 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.85□□□□□ -0.35
Col1a1P11087 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Col1a1P11087 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.85□□□□□ -0.35
Col1a1P11087 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC12.85□□□□□ -0.35
Col1a1P11087 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 Gm8618-201ENSMUST00000097570 432 ntBASIC12.85□□□□□ -0.35
Col1a1P11087 Gm10581-201ENSMUST00000097986 231 ntBASIC12.85□□□□□ -0.35
Col1a1P11087 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Col1a1P11087 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC12.85□□□□□ -0.35
Col1a1P11087 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 Gm10537-201ENSMUST00000192625 1698 ntBASIC12.85□□□□□ -0.35
Col1a1P11087 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.85□□□□□ -0.35
Col1a1P11087 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.85□□□□□ -0.35
Col1a1P11087 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Col1a1P11087 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col1a1P11087 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col1a1P11087 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col1a1P11087 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Col1a1P11087 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 Gm5244-201ENSMUST00000164001 339 ntBASIC12.85□□□□□ -0.35
Col1a1P11087 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col1a1P11087 Ighv1-86-201ENSMUST00000200562 353 ntBASIC12.85□□□□□ -0.35
Col1a1P11087 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Col1a1P11087 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC12.85□□□□□ -0.35
Col1a1P11087 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC12.85□□□□□ -0.35
Col1a1P11087 AC139155.1-201ENSMUST00000226043 444 ntBASIC12.85□□□□□ -0.35
Col1a1P11087 AC161172.1-201ENSMUST00000227801 486 ntBASIC12.85□□□□□ -0.35
Col1a1P11087 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col1a1P11087 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col1a1P11087 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col1a1P11087 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col1a1P11087 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col1a1P11087 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col1a1P11087 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col1a1P11087 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC12.84□□□□□ -0.35
Col1a1P11087 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Col1a1P11087 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col1a1P11087 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col1a1P11087 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col1a1P11087 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col1a1P11087 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Col1a1P11087 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.84□□□□□ -0.35
Col1a1P11087 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col1a1P11087 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col1a1P11087 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col1a1P11087 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col1a1P11087 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC12.84□□□□□ -0.35
Col1a1P11087 Gm13505-201ENSMUST00000121666 817 ntBASIC12.84□□□□□ -0.35
Col1a1P11087 Gm8464-202ENSMUST00000146697 1142 ntBASIC12.84□□□□□ -0.35
Col1a1P11087 Gm4750-201ENSMUST00000151942 1142 ntBASIC12.84□□□□□ -0.35
Col1a1P11087 Gm22662-201ENSMUST00000175290 256 ntBASIC12.84□□□□□ -0.35
Col1a1P11087 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC12.84□□□□□ -0.35
Col1a1P11087 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC12.84□□□□□ -0.35
Col1a1P11087 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC12.84□□□□□ -0.35
Col1a1P11087 Gm37944-201ENSMUST00000194233 414 ntBASIC12.84□□□□□ -0.35
Col1a1P11087 Gm37860-201ENSMUST00000195380 1034 ntBASIC12.84□□□□□ -0.35
Col1a1P11087 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Col1a1P11087 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC12.84□□□□□ -0.35
Col1a1P11087 Gm8557-201ENSMUST00000220777 475 ntBASIC12.84□□□□□ -0.35
Col1a1P11087 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col1a1P11087 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col1a1P11087 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col1a1P11087 Mir341-201ENSMUST00000093593 96 ntBASIC12.84□□□□□ -0.35
Col1a1P11087 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col1a1P11087 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col1a1P11087 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Col1a1P11087 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col1a1P11087 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Col1a1P11087 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col1a1P11087 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col1a1P11087 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col1a1P11087 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.83□□□□□ -0.36
Col1a1P11087 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col1a1P11087 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col1a1P11087 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
Col1a1P11087 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col1a1P11087 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col1a1P11087 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col1a1P11087 Gm42833-201ENSMUST00000196019 2124 ntBASIC12.83□□□□□ -0.36
Col1a1P11087 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms