Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
P04213 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.58□□□□□ -0.72
P04213 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P04213 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P04213 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
P04213 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.58□□□□□ -0.72
P04213 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10.58□□□□□ -0.72
P04213 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P04213 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.58□□□□□ -0.72
P04213 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.58□□□□□ -0.72
P04213 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.58□□□□□ -0.72
P04213 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.58□□□□□ -0.72
P04213 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.58□□□□□ -0.72
P04213 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.58□□□□□ -0.72
P04213 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.58□□□□□ -0.72
P04213 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P04213 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.58□□□□□ -0.72
P04213 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
P04213 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC10.58□□□□□ -0.72
P04213 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.58□□□□□ -0.72
P04213 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
P04213 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04213 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.57□□□□□ -0.72
P04213 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.57□□□□□ -0.72
P04213 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.57□□□□□ -0.72
P04213 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
P04213 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.57□□□□□ -0.72
P04213 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
P04213 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
P04213 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.57□□□□□ -0.72
P04213 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.57□□□□□ -0.72
P04213 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
P04213 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
P04213 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.57□□□□□ -0.72
P04213 Gm12986-201ENSMUST00000119037 967 ntBASIC10.57□□□□□ -0.72
P04213 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.57□□□□□ -0.72
P04213 Snord55-201ENSMUST00000174939 79 ntBASIC10.57□□□□□ -0.72
P04213 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
P04213 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
P04213 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.57□□□□□ -0.72
P04213 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.57□□□□□ -0.72
P04213 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.57□□□□□ -0.72
P04213 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.57□□□□□ -0.72
P04213 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
P04213 Gm10020-201ENSMUST00000081993 612 ntBASIC10.57□□□□□ -0.72
P04213 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC10.57□□□□□ -0.72
P04213 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04213 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms