Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 CT009764.1-201ENSMUST00000222260 483 ntBASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 AC137950.2-201ENSMUST00000227127 1089 ntBASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Gm4294-201ENSMUST00000105169 614 ntBASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Gm12218-201ENSMUST00000117666 399 ntBASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Gm12196-201ENSMUST00000120954 262 ntBASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Gm13263-201ENSMUST00000121271 838 ntBASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Mir6420-201ENSMUST00000185032 102 ntBASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Gm7504-201ENSMUST00000201449 424 ntBASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Gm18730-201ENSMUST00000218038 343 ntBASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 CT009713.8-202ENSMUST00000224732 385 ntBASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Gm8385-201ENSMUST00000058999 643 ntBASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Pcdh1F7BJK1 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Pcdh1F7BJK1 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Pcdh1F7BJK1 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Pcdh1F7BJK1 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Pcdh1F7BJK1 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Pcdh1F7BJK1 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Pcdh1F7BJK1 Gm28693-201ENSMUST00000189622 2638 ntBASIC9.96□□□□□ -0.81
Pcdh1F7BJK1 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Pcdh1F7BJK1 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Pcdh1F7BJK1 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Pcdh1F7BJK1 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Pcdh1F7BJK1 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Pcdh1F7BJK1 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Pcdh1F7BJK1 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Pcdh1F7BJK1 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Pcdh1F7BJK1 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Pcdh1F7BJK1 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Gm14017-201ENSMUST00000121934 386 ntBASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms