Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Gm8342-201ENSMUST00000209839 757 ntBASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 AC124732.3-201ENSMUST00000221835 1765 ntBASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 AC125374.1-201ENSMUST00000213573 1400 ntBASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Gm15374-201ENSMUST00000119313 844 ntBASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Gm37835-201ENSMUST00000193305 361 ntBASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Gm6108-201ENSMUST00000208365 367 ntBASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Gm5703-201ENSMUST00000186658 3973 ntBASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Chmp4cQ9D7F7 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Gm11956-201ENSMUST00000119525 512 ntBASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Gm29199-201ENSMUST00000187766 775 ntBASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Gm43482-201ENSMUST00000202797 1861 ntBASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC13.24□□□□□ -0.29
Chmp4cQ9D7F7 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Gm29245-201ENSMUST00000187332 1416 ntBASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Gm14193-201ENSMUST00000105067 153 ntBASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.23□□□□□ -0.29
Chmp4cQ9D7F7 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms