Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Gm19091-201ENSMUST00000208120 978 ntBASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Gm6108-201ENSMUST00000208365 367 ntBASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Smc1aQ9CU62 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smc1aQ9CU62 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smc1aQ9CU62 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC12.46□□□□□ -0.42
Smc1aQ9CU62 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smc1aQ9CU62 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smc1aQ9CU62 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smc1aQ9CU62 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smc1aQ9CU62 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.46□□□□□ -0.42
Smc1aQ9CU62 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Smc1aQ9CU62 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smc1aQ9CU62 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.46□□□□□ -0.42
Smc1aQ9CU62 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smc1aQ9CU62 Gm45828-201ENSMUST00000206938 1836 ntBASIC12.46□□□□□ -0.42
Smc1aQ9CU62 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smc1aQ9CU62 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Smc1aQ9CU62 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Smc1aQ9CU62 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Smc1aQ9CU62 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Smc1aQ9CU62 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smc1aQ9CU62 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smc1aQ9CU62 Gm45089-201ENSMUST00000208082 2040 ntBASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Gm45161-201ENSMUST00000207316 2263 ntBASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Gm28388-201ENSMUST00000186262 437 ntBASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Gm19009-201ENSMUST00000223072 823 ntBASIC12.45□□□□□ -0.42
Smc1aQ9CU62 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Gm37333-201ENSMUST00000192904 2251 ntBASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smc1aQ9CU62 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Gm12628-201ENSMUST00000122193 382 ntBASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Gm18367-201ENSMUST00000176139 600 ntBASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Gm25517-201ENSMUST00000083865 134 ntBASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Gm42602-201ENSMUST00000200288 3224 ntBASIC12.44□□□□□ -0.42
Smc1aQ9CU62 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms