Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Kif16b-203ENSMUST00000211861 4523 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Gm15353-201ENSMUST00000110860 702 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Gm13792-201ENSMUST00000121350 423 ntBASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Sfta2-201ENSMUST00000171166 508 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Cenph-201ENSMUST00000075550 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Gm27953-201ENSMUST00000185171 143 ntBASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Gm18165-201ENSMUST00000217426 928 ntBASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Stard3nl-205ENSMUST00000197565 1391 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Odam-201ENSMUST00000113274 872 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Gm11652-201ENSMUST00000117842 1267 ntBASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Gm11800-201ENSMUST00000120050 579 ntBASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Mir6909-201ENSMUST00000184212 62 ntBASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Ly6c1-206ENSMUST00000188845 784 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Gm29485-201ENSMUST00000190220 282 ntBASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Gm6129-201ENSMUST00000220725 801 ntBASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Gm13120-201ENSMUST00000117343 1446 ntBASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Gm13104-201ENSMUST00000119651 1446 ntBASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Zscan5b-203ENSMUST00000165445 1407 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Mir1893-201ENSMUST00000122565 83 ntBASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Eif3k-202ENSMUST00000207683 647 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Gm4953-201ENSMUST00000077309 483 ntBASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Gm16410-201ENSMUST00000094550 774 ntBASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Gm6727-201ENSMUST00000204102 1518 ntBASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Gm15383-201ENSMUST00000121889 1443 ntBASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Gm44124-201ENSMUST00000204159 472 ntBASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Cdh23Q99PF4 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdh23Q99PF4 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.91□□□□□ -0.66
Cdh23Q99PF4 Gm19798-201ENSMUST00000201502 457 ntBASIC10.91□□□□□ -0.66
Cdh23Q99PF4 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdh23Q99PF4 Gm18623-201ENSMUST00000219860 953 ntBASIC10.91□□□□□ -0.66
Cdh23Q99PF4 Ang2-202ENSMUST00000228835 896 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cdh23Q99PF4 Slc51b-201ENSMUST00000065894 709 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms