Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 AC153954.1-201ENSMUST00000216959 255 ntBASIC15.12■□□□□ 0.01
Rtn4Q99P72 Gm19994-201ENSMUST00000217086 586 ntBASIC15.12■□□□□ 0.01
Rtn4Q99P72 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Gm25799-201ENSMUST00000082643 107 ntBASIC15.12■□□□□ 0.01
Rtn4Q99P72 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rtn4Q99P72 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Gm22133-201ENSMUST00000102082 109 ntBASIC15.11■□□□□ 0.01
Rtn4Q99P72 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Gm14356-201ENSMUST00000118322 869 ntBASIC15.11■□□□□ 0.01
Rtn4Q99P72 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Gm5616-201ENSMUST00000165252 384 ntBASIC15.11■□□□□ 0.01
Rtn4Q99P72 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Gm18734-201ENSMUST00000172937 808 ntBASIC15.11■□□□□ 0.01
Rtn4Q99P72 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Gm8741-201ENSMUST00000174736 384 ntBASIC15.11■□□□□ 0.01
Rtn4Q99P72 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Rtn4Q99P72 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Gm37246-201ENSMUST00000192665 835 ntBASIC15.11■□□□□ 0.01
Rtn4Q99P72 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC15.11■□□□□ 0.01
Rtn4Q99P72 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC15.11■□□□□ 0.01
Rtn4Q99P72 AC117656.3-205ENSMUST00000224606 1205 ntBASIC15.11■□□□□ 0.01
Rtn4Q99P72 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 BC023105-201ENSMUST00000073997 1227 ntBASIC15.11■□□□□ 0.01
Rtn4Q99P72 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn4Q99P72 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Gm24340-201ENSMUST00000104208 97 ntBASIC15.1■□□□□ 0.01
Rtn4Q99P72 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Gm13731-201ENSMUST00000117332 196 ntBASIC15.1■□□□□ 0.01
Rtn4Q99P72 Gm9062-201ENSMUST00000117712 727 ntBASIC15.1■□□□□ 0.01
Rtn4Q99P72 Gm14854-201ENSMUST00000117758 841 ntBASIC15.1■□□□□ 0.01
Rtn4Q99P72 Gm11483-201ENSMUST00000119839 247 ntBASIC15.1■□□□□ 0.01
Rtn4Q99P72 Gm11350-201ENSMUST00000121436 870 ntBASIC15.1■□□□□ 0.01
Rtn4Q99P72 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC15.1■□□□□ 0.01
Rtn4Q99P72 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Gm30619-201ENSMUST00000213962 686 ntBASIC15.1■□□□□ 0.01
Rtn4Q99P72 Gm18705-201ENSMUST00000215985 913 ntBASIC15.1■□□□□ 0.01
Rtn4Q99P72 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn4Q99P72 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms