Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Gm6478-201ENSMUST00000099450 742 ntBASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 AC022682.1-201ENSMUST00000224624 2023 ntBASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp6nlQ80XC3 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Gm6758-201ENSMUST00000119643 1055 ntBASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Gm43752-201ENSMUST00000198475 697 ntBASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp6nlQ80XC3 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Gm43854-201ENSMUST00000200418 394 ntBASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Gm18010-201ENSMUST00000203553 202 ntBASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Gm6352-201ENSMUST00000203583 1134 ntBASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 AC164429.1-201ENSMUST00000224210 518 ntBASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 AC154407.1-201ENSMUST00000226777 526 ntBASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 AC158986.2-201ENSMUST00000227487 618 ntBASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Usp6nlQ80XC3 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms