Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Gm43184-201ENSMUST00000197247 542 ntBASIC11.3□□□□□ -0.6
Krt42Q6IFX2 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.3□□□□□ -0.6
Krt42Q6IFX2 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.3□□□□□ -0.6
Krt42Q6IFX2 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt42Q6IFX2 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt42Q6IFX2 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Krt42Q6IFX2 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Krt42Q6IFX2 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt42Q6IFX2 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt42Q6IFX2 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt42Q6IFX2 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Krt42Q6IFX2 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Krt42Q6IFX2 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.3□□□□□ -0.6
Krt42Q6IFX2 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt42Q6IFX2 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt42Q6IFX2 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.3□□□□□ -0.6
Krt42Q6IFX2 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt42Q6IFX2 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.29□□□□□ -0.6
Krt42Q6IFX2 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.29□□□□□ -0.6
Krt42Q6IFX2 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.29□□□□□ -0.6
Krt42Q6IFX2 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Gm37242-201ENSMUST00000191873 2085 ntBASIC11.29□□□□□ -0.6
Krt42Q6IFX2 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Krt42Q6IFX2 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Gm9220-201ENSMUST00000190721 2544 ntBASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Gm14726-201ENSMUST00000120623 896 ntBASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Gm6621-201ENSMUST00000193251 772 ntBASIC11.28□□□□□ -0.6
Krt42Q6IFX2 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Gm17825-201ENSMUST00000206836 794 ntBASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt42Q6IFX2 Gm45867-201ENSMUST00000208201 2317 ntBASIC11.27□□□□□ -0.6
Krt42Q6IFX2 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms