Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Hyal2-206ENSMUST00000195681 2968 ntBASIC12.6□□□□□ -0.39
Gm28047Q3US59 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28047Q3US59 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.6□□□□□ -0.39
Gm28047Q3US59 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Gm28047Q3US59 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Gm9133-201ENSMUST00000118289 540 ntBASIC12.6□□□□□ -0.39
Gm28047Q3US59 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.6□□□□□ -0.39
Gm28047Q3US59 Gm10051-201ENSMUST00000145209 414 ntBASIC12.6□□□□□ -0.39
Gm28047Q3US59 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Platr10-202ENSMUST00000191479 818 ntBASIC12.6□□□□□ -0.39
Gm28047Q3US59 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28047Q3US59 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.6□□□□□ -0.39
Gm28047Q3US59 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.6□□□□□ -0.39
Gm28047Q3US59 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.6□□□□□ -0.39
Gm28047Q3US59 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.6□□□□□ -0.39
Gm28047Q3US59 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28047Q3US59 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.6□□□□□ -0.39
Gm28047Q3US59 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.59□□□□□ -0.39
Gm28047Q3US59 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Gm25076-201ENSMUST00000104098 132 ntBASIC12.59□□□□□ -0.39
Gm28047Q3US59 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.59□□□□□ -0.39
Gm28047Q3US59 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC12.59□□□□□ -0.39
Gm28047Q3US59 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.59□□□□□ -0.39
Gm28047Q3US59 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Mir6546-201ENSMUST00000184460 62 ntBASIC12.59□□□□□ -0.39
Gm28047Q3US59 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.59□□□□□ -0.39
Gm28047Q3US59 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Mt1-202ENSMUST00000211807 1085 ntBASIC12.59□□□□□ -0.39
Gm28047Q3US59 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.59□□□□□ -0.39
Gm28047Q3US59 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.59□□□□□ -0.39
Gm28047Q3US59 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28047Q3US59 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Gm28047Q3US59 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.58□□□□□ -0.4
Gm28047Q3US59 Gm12986-201ENSMUST00000119037 967 ntBASIC12.58□□□□□ -0.4
Gm28047Q3US59 Gm14942-201ENSMUST00000119642 336 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms