Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm24990-201ENSMUST00000157406 323 ntBASIC12.28□□□□□ -0.44
Hmgb1P63158 Gm19246-201ENSMUST00000173599 255 ntBASIC12.28□□□□□ -0.44
Hmgb1P63158 Gm27341-201ENSMUST00000183570 106 ntBASIC12.28□□□□□ -0.44
Hmgb1P63158 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Hmgb1P63158 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 Gm37835-201ENSMUST00000193305 361 ntBASIC12.28□□□□□ -0.44
Hmgb1P63158 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.28□□□□□ -0.44
Hmgb1P63158 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.28□□□□□ -0.44
Hmgb1P63158 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Hmgb1P63158 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 Olfr584-201ENSMUST00000098210 964 ntBASIC12.28□□□□□ -0.44
Hmgb1P63158 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hmgb1P63158 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hmgb1P63158 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hmgb1P63158 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hmgb1P63158 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC12.28□□□□□ -0.44
Hmgb1P63158 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Hmgb1P63158 Gm43112-201ENSMUST00000196665 3122 ntBASIC12.28□□□□□ -0.44
Hmgb1P63158 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.28□□□□□ -0.44
Hmgb1P63158 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC12.28□□□□□ -0.44
Hmgb1P63158 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Hmgb1P63158 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmgb1P63158 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.27□□□□□ -0.44
Hmgb1P63158 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Hmgb1P63158 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmgb1P63158 Gm38215-201ENSMUST00000192321 2233 ntBASIC12.27□□□□□ -0.44
Hmgb1P63158 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmgb1P63158 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmgb1P63158 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hmgb1P63158 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmgb1P63158 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Hmgb1P63158 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgb1P63158 Atp2b2-202ENSMUST00000101044 4586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgb1P63158 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hmgb1P63158 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hmgb1P63158 Gm23200-201ENSMUST00000104379 132 ntBASIC12.27□□□□□ -0.45
Hmgb1P63158 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgb1P63158 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgb1P63158 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Hmgb1P63158 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC12.27□□□□□ -0.45
Hmgb1P63158 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.27□□□□□ -0.45
Hmgb1P63158 Gm7666-201ENSMUST00000146631 819 ntBASIC12.27□□□□□ -0.45
Hmgb1P63158 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.27□□□□□ -0.45
Hmgb1P63158 Gm43667-201ENSMUST00000198616 1095 ntBASIC12.27□□□□□ -0.45
Hmgb1P63158 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.27□□□□□ -0.45
Hmgb1P63158 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.27□□□□□ -0.45
Hmgb1P63158 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.27□□□□□ -0.45
Hmgb1P63158 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgb1P63158 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgb1P63158 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgb1P63158 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgb1P63158 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.27□□□□□ -0.45
Hmgb1P63158 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgb1P63158 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Hmgb1P63158 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgb1P63158 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hmgb1P63158 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.27□□□□□ -0.45
Hmgb1P63158 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgb1P63158 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgb1P63158 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgb1P63158 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgb1P63158 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgb1P63158 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgb1P63158 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgb1P63158 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.26□□□□□ -0.45
Hmgb1P63158 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.26□□□□□ -0.45
Hmgb1P63158 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.26□□□□□ -0.45
Hmgb1P63158 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.26□□□□□ -0.45
Hmgb1P63158 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.26□□□□□ -0.45
Hmgb1P63158 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.26□□□□□ -0.45
Hmgb1P63158 Gm23251-201ENSMUST00000103773 110 ntBASIC12.26□□□□□ -0.45
Hmgb1P63158 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.26□□□□□ -0.45
Hmgb1P63158 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.26□□□□□ -0.45
Hmgb1P63158 Gm7857-201ENSMUST00000117957 358 ntBASIC12.26□□□□□ -0.45
Hmgb1P63158 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.26□□□□□ -0.45
Hmgb1P63158 Gm21778-201ENSMUST00000178779 471 ntBASIC12.26□□□□□ -0.45
Hmgb1P63158 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
Hmgb1P63158 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.26□□□□□ -0.45
Hmgb1P63158 Gm29067-201ENSMUST00000190821 470 ntBASIC12.26□□□□□ -0.45
Hmgb1P63158 Gm37246-201ENSMUST00000192665 835 ntBASIC12.26□□□□□ -0.45
Hmgb1P63158 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.26□□□□□ -0.45
Hmgb1P63158 Gm32390-201ENSMUST00000212713 1172 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms