Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.34□□□□□ -0.59
Tubgcp3P58854 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
Tubgcp3P58854 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.34□□□□□ -0.59
Tubgcp3P58854 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.34□□□□□ -0.59
Tubgcp3P58854 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.59
Tubgcp3P58854 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.33□□□□□ -0.6
Tubgcp3P58854 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Gm16166-201ENSMUST00000118291 787 ntBASIC11.33□□□□□ -0.6
Tubgcp3P58854 Gm8302-201ENSMUST00000119217 852 ntBASIC11.33□□□□□ -0.6
Tubgcp3P58854 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.33□□□□□ -0.6
Tubgcp3P58854 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Mir6546-201ENSMUST00000184460 62 ntBASIC11.33□□□□□ -0.6
Tubgcp3P58854 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.33□□□□□ -0.6
Tubgcp3P58854 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.33□□□□□ -0.6
Tubgcp3P58854 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.33□□□□□ -0.6
Tubgcp3P58854 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.33□□□□□ -0.6
Tubgcp3P58854 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubgcp3P58854 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.33□□□□□ -0.6
Tubgcp3P58854 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.32□□□□□ -0.6
Tubgcp3P58854 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.32□□□□□ -0.6
Tubgcp3P58854 B9d1os-201ENSMUST00000137010 674 ntBASIC11.32□□□□□ -0.6
Tubgcp3P58854 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Mir7070-201ENSMUST00000183657 86 ntBASIC11.32□□□□□ -0.6
Tubgcp3P58854 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms