Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
Sox1P53783 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Sox1P53783 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sox1P53783 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sox1P53783 Gm24066-201ENSMUST00000104515 131 ntBASIC11.39□□□□□ -0.59
Sox1P53783 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.39□□□□□ -0.59
Sox1P53783 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sox1P53783 Gm15727-201ENSMUST00000122416 437 ntBASIC11.39□□□□□ -0.59
Sox1P53783 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC11.39□□□□□ -0.59
Sox1P53783 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC11.39□□□□□ -0.59
Sox1P53783 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Gm16560-201ENSMUST00000159115 404 ntBASIC11.39□□□□□ -0.59
Sox1P53783 Gm16165-201ENSMUST00000160140 795 ntBASIC11.39□□□□□ -0.59
Sox1P53783 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sox1P53783 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.39□□□□□ -0.59
Sox1P53783 Gm27833-201ENSMUST00000184285 124 ntBASIC11.39□□□□□ -0.59
Sox1P53783 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Sox1P53783 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox1P53783 Gm43103-201ENSMUST00000199021 802 ntBASIC11.39□□□□□ -0.59
Sox1P53783 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.39□□□□□ -0.59
Sox1P53783 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.39□□□□□ -0.59
Sox1P53783 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.39□□□□□ -0.59
Sox1P53783 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.39□□□□□ -0.59
Sox1P53783 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sox1P53783 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
Sox1P53783 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sox1P53783 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sox1P53783 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sox1P53783 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.38□□□□□ -0.59
Sox1P53783 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.38□□□□□ -0.59
Sox1P53783 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 AC107452.3-201ENSMUST00000228807 1308 ntBASIC11.38□□□□□ -0.59
Sox1P53783 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sox1P53783 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.38□□□□□ -0.59
Sox1P53783 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.38□□□□□ -0.59
Sox1P53783 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.38□□□□□ -0.59
Sox1P53783 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sox1P53783 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.38□□□□□ -0.59
Sox1P53783 Gm8754-201ENSMUST00000118391 520 ntBASIC11.38□□□□□ -0.59
Sox1P53783 Gm6276-201ENSMUST00000120159 579 ntBASIC11.38□□□□□ -0.59
Sox1P53783 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC11.38□□□□□ -0.59
Sox1P53783 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC11.38□□□□□ -0.59
Sox1P53783 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC11.38□□□□□ -0.59
Sox1P53783 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC11.38□□□□□ -0.59
Sox1P53783 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC11.38□□□□□ -0.59
Sox1P53783 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC11.38□□□□□ -0.59
Sox1P53783 Snord55-201ENSMUST00000174939 79 ntBASIC11.38□□□□□ -0.59
Sox1P53783 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC11.38□□□□□ -0.59
Sox1P53783 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sox1P53783 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sox1P53783 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sox1P53783 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.38□□□□□ -0.59
Sox1P53783 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Gm5259-201ENSMUST00000191231 800 ntBASIC11.38□□□□□ -0.59
Sox1P53783 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC11.38□□□□□ -0.59
Sox1P53783 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC11.38□□□□□ -0.59
Sox1P53783 Gm42732-201ENSMUST00000202887 1197 ntBASIC11.38□□□□□ -0.59
Sox1P53783 Gm5311-201ENSMUST00000203518 709 ntBASIC11.38□□□□□ -0.59
Sox1P53783 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC11.38□□□□□ -0.59
Sox1P53783 AC124772.3-201ENSMUST00000222535 575 ntBASIC11.38□□□□□ -0.59
Sox1P53783 Gm10537-201ENSMUST00000192625 1698 ntBASIC11.38□□□□□ -0.59
Sox1P53783 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms