Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6aP27664 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.84□□□□□ -0.35
Pde6aP27664 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.84□□□□□ -0.35
Pde6aP27664 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pde6aP27664 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6aP27664 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6aP27664 Gm42518-201ENSMUST00000196277 938 ntBASIC12.84□□□□□ -0.35
Pde6aP27664 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.84□□□□□ -0.35
Pde6aP27664 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.84□□□□□ -0.35
Pde6aP27664 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.84□□□□□ -0.35
Pde6aP27664 Gm9139-201ENSMUST00000218817 700 ntBASIC12.84□□□□□ -0.35
Pde6aP27664 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.84□□□□□ -0.35
Pde6aP27664 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6aP27664 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Pde6aP27664 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6aP27664 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6aP27664 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6aP27664 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6aP27664 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6aP27664 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6aP27664 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6aP27664 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6aP27664 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6aP27664 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6aP27664 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6aP27664 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pde6aP27664 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pde6aP27664 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pde6aP27664 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.83□□□□□ -0.36
Pde6aP27664 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.83□□□□□ -0.36
Pde6aP27664 Gm14270-201ENSMUST00000118388 846 ntBASIC12.83□□□□□ -0.36
Pde6aP27664 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC12.83□□□□□ -0.36
Pde6aP27664 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.83□□□□□ -0.36
Pde6aP27664 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.83□□□□□ -0.36
Pde6aP27664 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pde6aP27664 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.83□□□□□ -0.36
Pde6aP27664 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.83□□□□□ -0.36
Pde6aP27664 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.83□□□□□ -0.36
Pde6aP27664 Gm3726-201ENSMUST00000203110 785 ntBASIC12.83□□□□□ -0.36
Pde6aP27664 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.83□□□□□ -0.36
Pde6aP27664 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.83□□□□□ -0.36
Pde6aP27664 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pde6aP27664 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Pde6aP27664 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Pde6aP27664 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.83□□□□□ -0.36
Pde6aP27664 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.83□□□□□ -0.36
Pde6aP27664 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.83□□□□□ -0.36
Pde6aP27664 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.83□□□□□ -0.36
Pde6aP27664 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.83□□□□□ -0.36
Pde6aP27664 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Pde6aP27664 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6aP27664 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.82□□□□□ -0.36
Pde6aP27664 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.82□□□□□ -0.36
Pde6aP27664 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Gm3372-201ENSMUST00000198806 1792 ntBASIC12.82□□□□□ -0.36
Pde6aP27664 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pde6aP27664 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pde6aP27664 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pde6aP27664 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Gm25063-201ENSMUST00000104666 94 ntBASIC12.82□□□□□ -0.36
Pde6aP27664 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.82□□□□□ -0.36
Pde6aP27664 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Pde6aP27664 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.82□□□□□ -0.36
Pde6aP27664 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.82□□□□□ -0.36
Pde6aP27664 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.82□□□□□ -0.36
Pde6aP27664 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.82□□□□□ -0.36
Pde6aP27664 Gm9081-201ENSMUST00000182346 991 ntBASIC12.82□□□□□ -0.36
Pde6aP27664 Gm9358-201ENSMUST00000183067 927 ntBASIC12.82□□□□□ -0.36
Pde6aP27664 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.82□□□□□ -0.36
Pde6aP27664 Gm10752-201ENSMUST00000218348 729 ntBASIC12.82□□□□□ -0.36
Pde6aP27664 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms