Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp4cQ9D7F7 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp4cQ9D7F7 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp4cQ9D7F7 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Gm29499-201ENSMUST00000189151 486 ntBASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Gm28329-201ENSMUST00000191208 689 ntBASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Gm29171-201ENSMUST00000191397 486 ntBASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Gm7848-201ENSMUST00000210739 718 ntBASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 AC159002.1-201ENSMUST00000226714 924 ntBASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp4cQ9D7F7 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC13.27□□□□□ -0.28
Chmp4cQ9D7F7 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp4cQ9D7F7 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp4cQ9D7F7 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp4cQ9D7F7 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp4cQ9D7F7 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp4cQ9D7F7 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp4cQ9D7F7 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Chmp4cQ9D7F7 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp4cQ9D7F7 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Gm7857-201ENSMUST00000117957 358 ntBASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Gm9540-201ENSMUST00000188230 478 ntBASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Gm45856-201ENSMUST00000212752 416 ntBASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp4cQ9D7F7 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Gm23699-201ENSMUST00000158835 135 ntBASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp4cQ9D7F7 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms