Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.72□□□□□ -0.53
Usp11Q99K46 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Usp11Q99K46 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Gm14071-201ENSMUST00000117817 509 ntBASIC11.72□□□□□ -0.53
Usp11Q99K46 Gm11956-201ENSMUST00000119525 512 ntBASIC11.72□□□□□ -0.53
Usp11Q99K46 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.72□□□□□ -0.53
Usp11Q99K46 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Mir6546-201ENSMUST00000184460 62 ntBASIC11.72□□□□□ -0.53
Usp11Q99K46 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.72□□□□□ -0.53
Usp11Q99K46 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Usp11Q99K46 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.72□□□□□ -0.53
Usp11Q99K46 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.72□□□□□ -0.53
Usp11Q99K46 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.72□□□□□ -0.53
Usp11Q99K46 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.72□□□□□ -0.53
Usp11Q99K46 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp11Q99K46 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp11Q99K46 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp11Q99K46 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp11Q99K46 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Usp11Q99K46 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp11Q99K46 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp11Q99K46 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp11Q99K46 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.71□□□□□ -0.53
Usp11Q99K46 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.71□□□□□ -0.53
Usp11Q99K46 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp11Q99K46 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Usp11Q99K46 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Usp11Q99K46 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp11Q99K46 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Usp11Q99K46 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp11Q99K46 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp11Q99K46 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Usp11Q99K46 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp11Q99K46 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.71□□□□□ -0.53
Usp11Q99K46 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Usp11Q99K46 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.71□□□□□ -0.53
Usp11Q99K46 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp11Q99K46 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp11Q99K46 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.71□□□□□ -0.53
Usp11Q99K46 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.71□□□□□ -0.53
Usp11Q99K46 Gm15573-201ENSMUST00000119487 540 ntBASIC11.71□□□□□ -0.53
Usp11Q99K46 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.71□□□□□ -0.53
Usp11Q99K46 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.71□□□□□ -0.53
Usp11Q99K46 Gm4726-201ENSMUST00000135604 736 ntBASIC11.71□□□□□ -0.53
Usp11Q99K46 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.71□□□□□ -0.53
Usp11Q99K46 Gm6019-201ENSMUST00000148369 736 ntBASIC11.71□□□□□ -0.53
Usp11Q99K46 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.71□□□□□ -0.53
Usp11Q99K46 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.71□□□□□ -0.53
Usp11Q99K46 Gm18367-201ENSMUST00000176139 600 ntBASIC11.71□□□□□ -0.53
Usp11Q99K46 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.71□□□□□ -0.53
Usp11Q99K46 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Usp11Q99K46 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.71□□□□□ -0.53
Usp11Q99K46 Gm17831-201ENSMUST00000205579 900 ntBASIC11.71□□□□□ -0.53
Usp11Q99K46 Gm8959-201ENSMUST00000213150 571 ntBASIC11.71□□□□□ -0.53
Usp11Q99K46 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.71□□□□□ -0.53
Usp11Q99K46 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp11Q99K46 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Usp11Q99K46 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Usp11Q99K46 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Usp11Q99K46 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp11Q99K46 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp11Q99K46 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.71□□□□□ -0.54
Usp11Q99K46 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Usp11Q99K46 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Usp11Q99K46 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Usp11Q99K46 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Usp11Q99K46 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Usp11Q99K46 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Usp11Q99K46 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Usp11Q99K46 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Usp11Q99K46 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Usp11Q99K46 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Usp11Q99K46 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Usp11Q99K46 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp11Q99K46 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp11Q99K46 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp11Q99K46 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp11Q99K46 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Usp11Q99K46 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Usp11Q99K46 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.7□□□□□ -0.54
Usp11Q99K46 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Usp11Q99K46 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Usp11Q99K46 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Usp11Q99K46 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp11Q99K46 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Usp11Q99K46 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Usp11Q99K46 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.7□□□□□ -0.54
Usp11Q99K46 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms