Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Gm13422-201ENSMUST00000118834 504 ntBASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Gm22334-201ENSMUST00000158070 133 ntBASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Gm20426-201ENSMUST00000173657 440 ntBASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Mir8115-201ENSMUST00000184992 119 ntBASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Gm45398-201ENSMUST00000210561 165 ntBASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim29Q8R2Q0 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Gm14585-201ENSMUST00000120713 634 ntBASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Gm5523-201ENSMUST00000180415 997 ntBASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim29Q8R2Q0 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Gm25076-201ENSMUST00000104098 132 ntBASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Gm24514-201ENSMUST00000174961 285 ntBASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Gm9645-201ENSMUST00000197131 792 ntBASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Gm5302-201ENSMUST00000202130 796 ntBASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms