Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm7467-201ENSMUST00000185173 652 ntBASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Gm28746-201ENSMUST00000187453 380 ntBASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Gm45118-201ENSMUST00000208928 825 ntBASIC12.23□□□□□ -0.45
Trim9Q8C7M3 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim9Q8C7M3 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Nsd1-205ENSMUST00000224693 852 ntBASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim9Q8C7M3 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim9Q8C7M3 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Hyal2-206ENSMUST00000195681 2968 ntBASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Gm15197-201ENSMUST00000120526 478 ntBASIC12.22□□□□□ -0.45
Trim9Q8C7M3 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Gm18827-201ENSMUST00000188341 790 ntBASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Gm9463-201ENSMUST00000206707 601 ntBASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim9Q8C7M3 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Mir1896-201ENSMUST00000122641 81 ntBASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Gm25343-201ENSMUST00000157460 107 ntBASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms