Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Gm9440-201ENSMUST00000119667 539 ntBASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Gm13059-201ENSMUST00000119881 398 ntBASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Gm12997-201ENSMUST00000120207 640 ntBASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Gstp-ps-201ENSMUST00000195526 631 ntBASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Gm45433-201ENSMUST00000209386 247 ntBASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Gm37863-201ENSMUST00000194911 1457 ntBASIC9.72□□□□□ -0.85
Shisa3Q3UPR0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Shisa3Q3UPR0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Shisa3Q3UPR0 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Shisa3Q3UPR0 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC9.71□□□□□ -0.85
Shisa3Q3UPR0 AC174797.1-201ENSMUST00000224339 1649 ntBASIC9.71□□□□□ -0.85
Shisa3Q3UPR0 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Shisa3Q3UPR0 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Shisa3Q3UPR0 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Shisa3Q3UPR0 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Shisa3Q3UPR0 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.71□□□□□ -0.85
Shisa3Q3UPR0 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Shisa3Q3UPR0 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Shisa3Q3UPR0 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Shisa3Q3UPR0 AC154528.2-201ENSMUST00000228432 3023 ntBASIC9.71□□□□□ -0.85
Shisa3Q3UPR0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Shisa3Q3UPR0 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Shisa3Q3UPR0 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Gm14301-201ENSMUST00000120181 324 ntBASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Gm15225-201ENSMUST00000120449 1017 ntBASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Gm8876-201ENSMUST00000120768 1122 ntBASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Gm26736-201ENSMUST00000180425 1236 ntBASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Gm43906-201ENSMUST00000203194 906 ntBASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Gm18944-201ENSMUST00000207672 643 ntBASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 AC159205.5-202ENSMUST00000224849 386 ntBASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Gm8385-201ENSMUST00000058999 643 ntBASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Gm37057-201ENSMUST00000192624 1916 ntBASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Shisa3Q3UPR0 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms