Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC13.76□□□□□ -0.21
Cacna1sQ02789 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Rsl24d1-203ENSMUST00000165177 597 ntTSL 3 BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Gm28381-201ENSMUST00000188403 193 ntBASIC13.76□□□□□ -0.21
Cacna1sQ02789 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Gm32102-201ENSMUST00000196885 241 ntBASIC13.76□□□□□ -0.21
Cacna1sQ02789 CT025538.1-201ENSMUST00000223638 369 ntBASIC13.76□□□□□ -0.21
Cacna1sQ02789 CT025547.1-201ENSMUST00000225127 578 ntBASIC13.76□□□□□ -0.21
Cacna1sQ02789 AC124555.1-201ENSMUST00000227051 880 ntBASIC13.76□□□□□ -0.21
Cacna1sQ02789 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1sQ02789 4933424L21Rik-201ENSMUST00000142486 1186 ntTSL 5 BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Gm9578-201ENSMUST00000182354 753 ntBASIC13.76□□□□□ -0.21
Cacna1sQ02789 Gm17764-201ENSMUST00000185925 391 ntBASIC13.76□□□□□ -0.21
Cacna1sQ02789 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC13.76□□□□□ -0.21
Cacna1sQ02789 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC13.76□□□□□ -0.21
Cacna1sQ02789 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1sQ02789 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC13.75□□□□□ -0.21
Cacna1sQ02789 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cacna1sQ02789 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 BC002189-201ENSMUST00000195674 598 ntBASIC13.75□□□□□ -0.21
Cacna1sQ02789 Gm46189-201ENSMUST00000219395 644 ntTSL 3 BASIC13.75□□□□□ -0.21
Cacna1sQ02789 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1sQ02789 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Gm14853-201ENSMUST00000116081 549 ntBASIC13.74□□□□□ -0.21
Cacna1sQ02789 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Gm44139-201ENSMUST00000204903 373 ntBASIC13.74□□□□□ -0.21
Cacna1sQ02789 Zkscan7-205ENSMUST00000216462 990 ntBASIC13.74□□□□□ -0.21
Cacna1sQ02789 Gm46329-201ENSMUST00000218373 609 ntTSL 5 BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Gm6129-201ENSMUST00000220725 801 ntBASIC13.74□□□□□ -0.21
Cacna1sQ02789 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Gm5910-201ENSMUST00000211819 1746 ntBASIC13.74□□□□□ -0.21
Cacna1sQ02789 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Gm15539-201ENSMUST00000118452 566 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms