Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
NrlP54846 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
NrlP54846 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
NrlP54846 Mir7035-201ENSMUST00000184713 82 ntBASIC11.86□□□□□ -0.51
NrlP54846 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
NrlP54846 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.86□□□□□ -0.51
NrlP54846 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.86□□□□□ -0.51
NrlP54846 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
NrlP54846 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
NrlP54846 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NrlP54846 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NrlP54846 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
NrlP54846 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.85□□□□□ -0.51
NrlP54846 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.85□□□□□ -0.51
NrlP54846 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Snord23-201ENSMUST00000116828 109 ntBASIC11.85□□□□□ -0.51
NrlP54846 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC11.85□□□□□ -0.51
NrlP54846 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Gm5529-201ENSMUST00000165691 891 ntBASIC11.85□□□□□ -0.51
NrlP54846 Gm9162-201ENSMUST00000182081 991 ntBASIC11.85□□□□□ -0.51
NrlP54846 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
NrlP54846 Gm45135-201ENSMUST00000206787 1184 ntBASIC11.85□□□□□ -0.51
NrlP54846 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.85□□□□□ -0.51
NrlP54846 Gm4903-201ENSMUST00000210462 405 ntBASIC11.85□□□□□ -0.51
NrlP54846 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
NrlP54846 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
NrlP54846 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
NrlP54846 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.85□□□□□ -0.51
NrlP54846 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.85□□□□□ -0.51
NrlP54846 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.85□□□□□ -0.51
NrlP54846 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
NrlP54846 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
NrlP54846 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.85□□□□□ -0.51
NrlP54846 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NrlP54846 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NrlP54846 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
NrlP54846 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NrlP54846 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
NrlP54846 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NrlP54846 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
NrlP54846 Gm13039-201ENSMUST00000118638 794 ntBASIC11.84□□□□□ -0.51
NrlP54846 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 Gm3329-201ENSMUST00000159873 556 ntBASIC11.84□□□□□ -0.51
NrlP54846 Gm24328-201ENSMUST00000175104 67 ntBASIC11.84□□□□□ -0.51
NrlP54846 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.84□□□□□ -0.51
NrlP54846 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.84□□□□□ -0.51
NrlP54846 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.84□□□□□ -0.51
NrlP54846 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.84□□□□□ -0.51
NrlP54846 Gm45085-201ENSMUST00000209100 441 ntBASIC11.84□□□□□ -0.51
NrlP54846 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.84□□□□□ -0.51
NrlP54846 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.84□□□□□ -0.51
NrlP54846 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 Gm10020-201ENSMUST00000081993 612 ntBASIC11.84□□□□□ -0.51
NrlP54846 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms