Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rph3aP47708 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rph3aP47708 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Gm43457-201ENSMUST00000200867 2409 ntBASIC10.8□□□□□ -0.68
Rph3aP47708 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rph3aP47708 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
Rph3aP47708 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Actr2-201ENSMUST00000000137 3631 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.8□□□□□ -0.68
Rph3aP47708 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Gm23272-201ENSMUST00000104053 129 ntBASIC10.8□□□□□ -0.68
Rph3aP47708 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.8□□□□□ -0.68
Rph3aP47708 Gm14585-201ENSMUST00000120713 634 ntBASIC10.8□□□□□ -0.68
Rph3aP47708 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Gm44315-201ENSMUST00000203041 219 ntBASIC10.8□□□□□ -0.68
Rph3aP47708 Gm43916-201ENSMUST00000205062 967 ntBASIC10.8□□□□□ -0.68
Rph3aP47708 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.8□□□□□ -0.68
Rph3aP47708 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.8□□□□□ -0.68
Rph3aP47708 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.8□□□□□ -0.68
Rph3aP47708 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rph3aP47708 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.8□□□□□ -0.68
Rph3aP47708 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.8□□□□□ -0.68
Rph3aP47708 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.8□□□□□ -0.68
Rph3aP47708 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Rph3aP47708 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.8□□□□□ -0.68
Rph3aP47708 Tmem63a-201ENSMUST00000027800 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Slc25a45-201ENSMUST00000025732 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rph3aP47708 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Rph3aP47708 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Rph3aP47708 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 Gm45769-201ENSMUST00000204588 1828 ntBASIC10.79□□□□□ -0.68
Rph3aP47708 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.79□□□□□ -0.68
Rph3aP47708 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.79□□□□□ -0.68
Rph3aP47708 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.79□□□□□ -0.68
Rph3aP47708 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rph3aP47708 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Rph3aP47708 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.79□□□□□ -0.68
Rph3aP47708 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.79□□□□□ -0.68
Rph3aP47708 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.79□□□□□ -0.68
Rph3aP47708 Gm8111-201ENSMUST00000117659 987 ntBASIC10.79□□□□□ -0.68
Rph3aP47708 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rph3aP47708 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rph3aP47708 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Rph3aP47708 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rph3aP47708 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rph3aP47708 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rph3aP47708 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.79□□□□□ -0.68
Rph3aP47708 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.79□□□□□ -0.68
Rph3aP47708 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.79□□□□□ -0.68
Rph3aP47708 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.79□□□□□ -0.68
Rph3aP47708 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Rph3aP47708 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.79□□□□□ -0.68
Rph3aP47708 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rph3aP47708 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rph3aP47708 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rph3aP47708 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.79□□□□□ -0.68
Rph3aP47708 AC115746.1-201ENSMUST00000228949 3617 ntBASIC10.79□□□□□ -0.68
Rph3aP47708 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rph3aP47708 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms