Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Gm6430-201ENSMUST00000054664 1248 ntBASIC9.73□□□□□ -0.85
Upk2P38575 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC9.73□□□□□ -0.85
Upk2P38575 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Upk2P38575 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Upk2P38575 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.73□□□□□ -0.85
Upk2P38575 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC9.73□□□□□ -0.85
Upk2P38575 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.72□□□□□ -0.85
Upk2P38575 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.72□□□□□ -0.85
Upk2P38575 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Upk2P38575 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Upk2P38575 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Upk2P38575 Gm16071-201ENSMUST00000119589 793 ntBASIC9.72□□□□□ -0.85
Upk2P38575 Gm6485-201ENSMUST00000160676 439 ntBASIC9.72□□□□□ -0.85
Upk2P38575 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC9.72□□□□□ -0.85
Upk2P38575 Gm27441-201ENSMUST00000185000 105 ntBASIC9.72□□□□□ -0.85
Upk2P38575 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC9.72□□□□□ -0.85
Upk2P38575 Gm17826-201ENSMUST00000189720 798 ntBASIC9.72□□□□□ -0.85
Upk2P38575 Platr10-202ENSMUST00000191479 818 ntBASIC9.72□□□□□ -0.85
Upk2P38575 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Gm37299-201ENSMUST00000193951 826 ntBASIC9.72□□□□□ -0.85
Upk2P38575 Gm43068-201ENSMUST00000201095 1273 ntBASIC9.72□□□□□ -0.85
Upk2P38575 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 AC124433.1-201ENSMUST00000224483 1063 ntBASIC9.72□□□□□ -0.85
Upk2P38575 AC154589.2-201ENSMUST00000228847 251 ntBASIC9.72□□□□□ -0.85
Upk2P38575 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Upk2P38575 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.72□□□□□ -0.85
Upk2P38575 Gm6655-201ENSMUST00000201932 1309 ntBASIC9.72□□□□□ -0.85
Upk2P38575 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC9.72□□□□□ -0.85
Upk2P38575 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC9.72□□□□□ -0.85
Upk2P38575 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Upk2P38575 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.85
Upk2P38575 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Upk2P38575 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Upk2P38575 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Upk2P38575 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.71□□□□□ -0.85
Upk2P38575 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Upk2P38575 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Upk2P38575 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Upk2P38575 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Upk2P38575 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Upk2P38575 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Upk2P38575 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Upk2P38575 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Upk2P38575 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Upk2P38575 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.86
Upk2P38575 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC9.71□□□□□ -0.86
Upk2P38575 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Upk2P38575 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.71□□□□□ -0.86
Upk2P38575 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Upk2P38575 Snord55-201ENSMUST00000174939 79 ntBASIC9.71□□□□□ -0.86
Upk2P38575 Gm10731-201ENSMUST00000181171 448 ntBASIC9.71□□□□□ -0.86
Upk2P38575 Gm9211-201ENSMUST00000182882 975 ntBASIC9.71□□□□□ -0.86
Upk2P38575 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Upk2P38575 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
Upk2P38575 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC9.71□□□□□ -0.86
Upk2P38575 Gm8197-202ENSMUST00000193422 934 ntBASIC9.71□□□□□ -0.86
Upk2P38575 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
Upk2P38575 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC9.71□□□□□ -0.86
Upk2P38575 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC9.71□□□□□ -0.86
Upk2P38575 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.71□□□□□ -0.86
Upk2P38575 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Upk2P38575 Gm10263-201ENSMUST00000085163 300 ntBASIC9.71□□□□□ -0.86
Upk2P38575 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Upk2P38575 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Upk2P38575 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms