Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Cdx1P18111 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cdx1P18111 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC9.03□□□□□ -0.96
Cdx1P18111 Gm37582-201ENSMUST00000192953 1409 ntBASIC9.03□□□□□ -0.96
Cdx1P18111 AC154849.3-201ENSMUST00000223733 1660 ntBASIC9.03□□□□□ -0.96
Cdx1P18111 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 Tec-201ENSMUST00000071944 2659 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 Gm10764-202ENSMUST00000220397 2335 ntBASIC9.03□□□□□ -0.96
Cdx1P18111 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.03□□□□□ -0.96
Cdx1P18111 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Cdx1P18111 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.96
Cdx1P18111 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cdx1P18111 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Cdx1P18111 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC9.02□□□□□ -0.96
Cdx1P18111 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cdx1P18111 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Cdx1P18111 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Cdx1P18111 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC9.02□□□□□ -0.97
Cdx1P18111 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Cdx1P18111 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.02□□□□□ -0.97
Cdx1P18111 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.02□□□□□ -0.97
Cdx1P18111 Gm14832-201ENSMUST00000121289 322 ntBASIC9.02□□□□□ -0.97
Cdx1P18111 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC9.02□□□□□ -0.97
Cdx1P18111 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Cdx1P18111 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC9.02□□□□□ -0.97
Cdx1P18111 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Gm6963-201ENSMUST00000147879 379 ntBASIC9.02□□□□□ -0.97
Cdx1P18111 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.02□□□□□ -0.97
Cdx1P18111 Gm5070-201ENSMUST00000177599 862 ntBASIC9.02□□□□□ -0.97
Cdx1P18111 Gm28882-201ENSMUST00000185504 314 ntBASIC9.02□□□□□ -0.97
Cdx1P18111 Gm43947-201ENSMUST00000203019 959 ntBASIC9.02□□□□□ -0.97
Cdx1P18111 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 AC107638.1-201ENSMUST00000213690 1061 ntBASIC9.02□□□□□ -0.97
Cdx1P18111 Gm18730-201ENSMUST00000218038 343 ntBASIC9.02□□□□□ -0.97
Cdx1P18111 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 AC165260.3-202ENSMUST00000224550 1031 ntBASIC9.02□□□□□ -0.97
Cdx1P18111 Gzmn-202ENSMUST00000225535 989 ntBASIC9.02□□□□□ -0.97
Cdx1P18111 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Cdx1P18111 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.02□□□□□ -0.97
Cdx1P18111 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Cdx1P18111 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Cir1-201ENSMUST00000058615 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Gm38910-201ENSMUST00000204630 2448 ntBASIC9.02□□□□□ -0.97
Cdx1P18111 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Gm10531-201ENSMUST00000193527 2303 ntBASIC9.02□□□□□ -0.97
Cdx1P18111 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx1P18111 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC9.01□□□□□ -0.97
Cdx1P18111 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC9.01□□□□□ -0.97
Cdx1P18111 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Cdx1P18111 Tal2-201ENSMUST00000030124 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Cdx1P18111 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC9.01□□□□□ -0.97
Cdx1P18111 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Cdx1P18111 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Acmsd-201ENSMUST00000038006 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms