Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Gm11735-201ENSMUST00000106377 1581 ntBASIC9.67□□□□□ -0.86
UbbP0CG49 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
UbbP0CG49 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
UbbP0CG49 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC9.67□□□□□ -0.86
UbbP0CG49 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC9.67□□□□□ -0.86
UbbP0CG49 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.67□□□□□ -0.86
UbbP0CG49 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
UbbP0CG49 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC9.67□□□□□ -0.86
UbbP0CG49 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
UbbP0CG49 Gm5302-201ENSMUST00000202130 796 ntBASIC9.67□□□□□ -0.86
UbbP0CG49 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Gm45433-201ENSMUST00000209386 247 ntBASIC9.67□□□□□ -0.86
UbbP0CG49 Gm8913-201ENSMUST00000209491 641 ntBASIC9.67□□□□□ -0.86
UbbP0CG49 Gm45575-201ENSMUST00000210283 548 ntBASIC9.67□□□□□ -0.86
UbbP0CG49 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.67□□□□□ -0.86
UbbP0CG49 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC9.67□□□□□ -0.86
UbbP0CG49 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC9.67□□□□□ -0.86
UbbP0CG49 AC151275.1-201ENSMUST00000224870 585 ntBASIC9.67□□□□□ -0.86
UbbP0CG49 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC9.67□□□□□ -0.86
UbbP0CG49 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
UbbP0CG49 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Gm17383-201ENSMUST00000078739 1041 ntBASIC9.67□□□□□ -0.86
UbbP0CG49 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
UbbP0CG49 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UbbP0CG49 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
UbbP0CG49 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
UbbP0CG49 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC9.66□□□□□ -0.86
UbbP0CG49 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC9.66□□□□□ -0.86
UbbP0CG49 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
UbbP0CG49 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.66□□□□□ -0.86
UbbP0CG49 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
UbbP0CG49 Gm23949-201ENSMUST00000104027 127 ntBASIC9.66□□□□□ -0.86
UbbP0CG49 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.66□□□□□ -0.86
UbbP0CG49 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.66□□□□□ -0.86
UbbP0CG49 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC9.66□□□□□ -0.86
UbbP0CG49 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Gm38341-201ENSMUST00000195357 515 ntBASIC9.66□□□□□ -0.86
UbbP0CG49 Gm37301-201ENSMUST00000195412 568 ntBASIC9.66□□□□□ -0.86
UbbP0CG49 Gm3961-201ENSMUST00000204425 994 ntBASIC9.66□□□□□ -0.86
UbbP0CG49 Gm44967-201ENSMUST00000207047 631 ntBASIC9.66□□□□□ -0.86
UbbP0CG49 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.66□□□□□ -0.86
UbbP0CG49 AC164437.3-201ENSMUST00000228323 347 ntBASIC9.66□□□□□ -0.86
UbbP0CG49 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
UbbP0CG49 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.66□□□□□ -0.86
UbbP0CG49 Nudt13-207ENSMUST00000224311 1574 ntBASIC9.66□□□□□ -0.86
UbbP0CG49 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
UbbP0CG49 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
UbbP0CG49 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UbbP0CG49 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms