Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.03□□□□□ -0.64
Pknox1O70477 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Pknox1O70477 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.03□□□□□ -0.64
Pknox1O70477 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Pknox1O70477 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Pknox1O70477 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.03□□□□□ -0.64
Pknox1O70477 Gm12218-201ENSMUST00000117666 399 ntBASIC11.03□□□□□ -0.64
Pknox1O70477 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.03□□□□□ -0.64
Pknox1O70477 Gm24990-201ENSMUST00000157406 323 ntBASIC11.03□□□□□ -0.64
Pknox1O70477 Gm19246-201ENSMUST00000173599 255 ntBASIC11.03□□□□□ -0.64
Pknox1O70477 Gm21778-201ENSMUST00000178779 471 ntBASIC11.03□□□□□ -0.64
Pknox1O70477 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.03□□□□□ -0.64
Pknox1O70477 Gm37284-201ENSMUST00000193607 539 ntBASIC11.03□□□□□ -0.64
Pknox1O70477 Gm43186-201ENSMUST00000198130 824 ntBASIC11.03□□□□□ -0.64
Pknox1O70477 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.03□□□□□ -0.64
Pknox1O70477 Gm7848-201ENSMUST00000210739 718 ntBASIC11.03□□□□□ -0.64
Pknox1O70477 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.03□□□□□ -0.64
Pknox1O70477 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.03□□□□□ -0.64
Pknox1O70477 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.03□□□□□ -0.64
Pknox1O70477 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.03□□□□□ -0.64
Pknox1O70477 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Pknox1O70477 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Pknox1O70477 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pknox1O70477 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pknox1O70477 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Pknox1O70477 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.02□□□□□ -0.64
Pknox1O70477 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pknox1O70477 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Pknox1O70477 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pknox1O70477 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pknox1O70477 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pknox1O70477 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.02□□□□□ -0.64
Pknox1O70477 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Pknox1O70477 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.02□□□□□ -0.65
Pknox1O70477 Gm23251-201ENSMUST00000103773 110 ntBASIC11.02□□□□□ -0.65
Pknox1O70477 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Gm7857-201ENSMUST00000117957 358 ntBASIC11.02□□□□□ -0.65
Pknox1O70477 Gm16219-201ENSMUST00000120096 274 ntBASIC11.02□□□□□ -0.65
Pknox1O70477 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.02□□□□□ -0.65
Pknox1O70477 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.65
Pknox1O70477 Gm29067-201ENSMUST00000190821 470 ntBASIC11.02□□□□□ -0.65
Pknox1O70477 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Pknox1O70477 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.02□□□□□ -0.65
Pknox1O70477 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.02□□□□□ -0.65
Pknox1O70477 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.02□□□□□ -0.65
Pknox1O70477 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.02□□□□□ -0.65
Pknox1O70477 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pknox1O70477 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.02□□□□□ -0.65
Pknox1O70477 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Pknox1O70477 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pknox1O70477 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms