Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc188F6WEU2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc188F6WEU2 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ccdc188F6WEU2 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc188F6WEU2 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc188F6WEU2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc188F6WEU2 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Ccdc188F6WEU2 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 5330411J11Rik-201ENSMUST00000137162 1635 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Gm9516-201ENSMUST00000119684 424 ntBASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Gm13377-201ENSMUST00000137984 683 ntBASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Gm38314-201ENSMUST00000195709 625 ntBASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Gm6008-201ENSMUST00000206542 874 ntBASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 CT025547.1-201ENSMUST00000225127 578 ntBASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Gm10689-201ENSMUST00000098864 432 ntBASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Ccdc188F6WEU2 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccdc188F6WEU2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Ccdc188F6WEU2 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Ccdc188F6WEU2 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccdc188F6WEU2 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccdc188F6WEU2 Phactr1-214ENSMUST00000149235 2076 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Ccdc188F6WEU2 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccdc188F6WEU2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccdc188F6WEU2 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.21□□□□□ -0.62
Ccdc188F6WEU2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccdc188F6WEU2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccdc188F6WEU2 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.21□□□□□ -0.62
Ccdc188F6WEU2 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Ccdc188F6WEU2 Dcstamp-205ENSMUST00000228556 1684 ntBASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Gm15661-201ENSMUST00000117390 556 ntBASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Stard4-202ENSMUST00000118990 648 ntTSL 2 BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Gm12362-201ENSMUST00000121986 342 ntBASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Gm5274-201ENSMUST00000182641 1003 ntBASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Gm31784-201ENSMUST00000209523 1053 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ccdc188F6WEU2 Olfr1511-201ENSMUST00000078171 957 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms