Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Gm38271-201ENSMUST00000192296 1603 ntBASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Gm13045-201ENSMUST00000119019 712 ntBASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Gm24992-201ENSMUST00000157412 130 ntBASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Mir7051-201ENSMUST00000184167 73 ntBASIC12.7□□□□□ -0.38
Trim11Q99PQ2 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Gm5451-201ENSMUST00000080545 579 ntBASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.7□□□□□ -0.38
Trim11Q99PQ2 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Gm11956-201ENSMUST00000119525 512 ntBASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Gm14716-201ENSMUST00000120138 718 ntBASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Gm8737-201ENSMUST00000122208 642 ntBASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Gm23045-201ENSMUST00000175041 96 ntBASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Gm44315-201ENSMUST00000203041 219 ntBASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.69□□□□□ -0.38
Trim11Q99PQ2 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Gm23105-201ENSMUST00000083719 134 ntBASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Trim11Q99PQ2 Gm42427-201ENSMUST00000200473 5292 ntBASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms