Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm7150-201ENSMUST00000122032 981 ntBASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Gm13182-201ENSMUST00000122241 312 ntBASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Olfr584-201ENSMUST00000098210 964 ntBASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Gm10110-202ENSMUST00000228705 3220 ntBASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Gm37954-201ENSMUST00000195400 2071 ntBASIC13.16□□□□□ -0.3
Nup88Q8CEC0 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Gm11675-201ENSMUST00000121873 832 ntBASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.15□□□□□ -0.3
Nup88Q8CEC0 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.15□□□□□ -0.3
Nup88Q8CEC0 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Gm5451-201ENSMUST00000080545 579 ntBASIC13.15□□□□□ -0.3
Nup88Q8CEC0 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nup88Q8CEC0 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
Nup88Q8CEC0 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Nup88Q8CEC0 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Nup88Q8CEC0 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup88Q8CEC0 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup88Q8CEC0 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC13.14□□□□□ -0.31
Nup88Q8CEC0 Gm26013-201ENSMUST00000104404 119 ntBASIC13.14□□□□□ -0.31
Nup88Q8CEC0 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nup88Q8CEC0 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup88Q8CEC0 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.14□□□□□ -0.31
Nup88Q8CEC0 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.14□□□□□ -0.31
Nup88Q8CEC0 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.14□□□□□ -0.31
Nup88Q8CEC0 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.14□□□□□ -0.31
Nup88Q8CEC0 Gm8459-201ENSMUST00000162504 760 ntBASIC13.14□□□□□ -0.31
Nup88Q8CEC0 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nup88Q8CEC0 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.14□□□□□ -0.31
Nup88Q8CEC0 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nup88Q8CEC0 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Nup88Q8CEC0 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nup88Q8CEC0 Gm42657-201ENSMUST00000201746 211 ntBASIC13.14□□□□□ -0.31
Nup88Q8CEC0 Gm8342-201ENSMUST00000209839 757 ntBASIC13.14□□□□□ -0.31
Nup88Q8CEC0 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.14□□□□□ -0.31
Nup88Q8CEC0 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.14□□□□□ -0.31
Nup88Q8CEC0 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.14□□□□□ -0.31
Nup88Q8CEC0 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms