Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Gm43372-201ENSMUST00000202662 3016 ntBASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Gm32111-201ENSMUST00000207689 846 ntBASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Gm9176-201ENSMUST00000219955 1120 ntBASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 AC093022.1-201ENSMUST00000226949 1072 ntBASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Gm21115-201ENSMUST00000187565 2578 ntBASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Gm5403-201ENSMUST00000117105 2795 ntBASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Gm42971-201ENSMUST00000199228 2079 ntBASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Gm25700-201ENSMUST00000177693 110 ntBASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Gm9678-201ENSMUST00000198979 1149 ntBASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 AC102569.1-201ENSMUST00000221563 685 ntBASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Gm7103-201ENSMUST00000195642 1852 ntBASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Tsen54Q8C2A2 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Tsen54Q8C2A2 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Tsen54Q8C2A2 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Tsen54Q8C2A2 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Tsen54Q8C2A2 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Tsen54Q8C2A2 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Tsen54Q8C2A2 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Tsen54Q8C2A2 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Tsen54Q8C2A2 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Tsen54Q8C2A2 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Tsen54Q8C2A2 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms