Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Gm11952-201ENSMUST00000121172 821 ntBASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Mir1905-201ENSMUST00000122779 82 ntBASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Gm24809-201ENSMUST00000175318 271 ntBASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Gm5700-201ENSMUST00000191483 989 ntBASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Gm9487-201ENSMUST00000216600 472 ntBASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Capsl-202ENSMUST00000226688 739 ntBASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rc3h1Q4VGL6 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Gm649-201ENSMUST00000117284 1054 ntBASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Gm11801-201ENSMUST00000117807 746 ntBASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Gm13183-201ENSMUST00000118615 789 ntBASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Gm45071-201ENSMUST00000205353 571 ntBASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Gm26670-202ENSMUST00000226862 340 ntBASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Mir483-201ENSMUST00000093631 73 ntBASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h1Q4VGL6 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rc3h1Q4VGL6 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rc3h1Q4VGL6 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rc3h1Q4VGL6 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Rc3h1Q4VGL6 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rc3h1Q4VGL6 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rc3h1Q4VGL6 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rc3h1Q4VGL6 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rc3h1Q4VGL6 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rc3h1Q4VGL6 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rc3h1Q4VGL6 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rc3h1Q4VGL6 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rc3h1Q4VGL6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Rc3h1Q4VGL6 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rc3h1Q4VGL6 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rc3h1Q4VGL6 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Rc3h1Q4VGL6 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rc3h1Q4VGL6 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms