Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Cacna1aP97445 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.34□□□□□ -0.75
Cacna1aP97445 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.34□□□□□ -0.75
Cacna1aP97445 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cacna1aP97445 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Cacna1aP97445 Gm14524-201ENSMUST00000121066 683 ntBASIC10.34□□□□□ -0.75
Cacna1aP97445 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC10.34□□□□□ -0.75
Cacna1aP97445 Zfp419-201ENSMUST00000173446 916 ntBASIC10.34□□□□□ -0.75
Cacna1aP97445 Gm27149-201ENSMUST00000184716 1266 ntBASIC10.34□□□□□ -0.75
Cacna1aP97445 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Cacna1aP97445 Gm2566-201ENSMUST00000201267 431 ntBASIC10.34□□□□□ -0.75
Cacna1aP97445 Gm5291-201ENSMUST00000201965 899 ntBASIC10.34□□□□□ -0.75
Cacna1aP97445 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC10.34□□□□□ -0.75
Cacna1aP97445 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.34□□□□□ -0.75
Cacna1aP97445 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC10.34□□□□□ -0.75
Cacna1aP97445 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cacna1aP97445 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cacna1aP97445 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.33□□□□□ -0.76
Cacna1aP97445 Gm7701-201ENSMUST00000163185 1479 ntBASIC10.33□□□□□ -0.76
Cacna1aP97445 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC10.33□□□□□ -0.76
Cacna1aP97445 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.33□□□□□ -0.76
Cacna1aP97445 Gm7939-201ENSMUST00000201233 1050 ntBASIC10.33□□□□□ -0.76
Cacna1aP97445 BC080696-201ENSMUST00000202858 1218 ntBASIC10.33□□□□□ -0.76
Cacna1aP97445 Gm9644-201ENSMUST00000212828 1183 ntBASIC10.33□□□□□ -0.76
Cacna1aP97445 CT030166.5-201ENSMUST00000222249 420 ntBASIC10.33□□□□□ -0.76
Cacna1aP97445 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.33□□□□□ -0.76
Cacna1aP97445 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cacna1aP97445 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cacna1aP97445 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cacna1aP97445 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.33□□□□□ -0.76
Cacna1aP97445 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cacna1aP97445 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cacna1aP97445 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cacna1aP97445 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Cacna1aP97445 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.33□□□□□ -0.76
Cacna1aP97445 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC10.33□□□□□ -0.76
Cacna1aP97445 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Gm9372-201ENSMUST00000168454 430 ntBASIC10.33□□□□□ -0.76
Cacna1aP97445 Wbp1-209ENSMUST00000205023 716 ntBASIC10.33□□□□□ -0.76
Cacna1aP97445 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Gm18042-201ENSMUST00000219887 790 ntBASIC10.33□□□□□ -0.76
Cacna1aP97445 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Gm25580-201ENSMUST00000083409 327 ntBASIC10.33□□□□□ -0.76
Cacna1aP97445 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.33□□□□□ -0.76
Cacna1aP97445 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.33□□□□□ -0.76
Cacna1aP97445 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC10.33□□□□□ -0.76
Cacna1aP97445 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.33□□□□□ -0.76
Cacna1aP97445 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC10.33□□□□□ -0.76
Cacna1aP97445 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Cacna1aP97445 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cacna1aP97445 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cacna1aP97445 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cacna1aP97445 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cacna1aP97445 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cacna1aP97445 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cacna1aP97445 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cacna1aP97445 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cacna1aP97445 Gm22937-201ENSMUST00000103954 131 ntBASIC10.32□□□□□ -0.76
Cacna1aP97445 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Cacna1aP97445 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Cacna1aP97445 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms