Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC9.85□□□□□ -0.83
GdnfP48540 Gm2260-201ENSMUST00000184965 657 ntBASIC9.85□□□□□ -0.83
GdnfP48540 Gm38319-201ENSMUST00000194537 1266 ntBASIC9.85□□□□□ -0.83
GdnfP48540 Gstp-ps-201ENSMUST00000195526 631 ntBASIC9.85□□□□□ -0.83
GdnfP48540 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
GdnfP48540 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC9.85□□□□□ -0.83
GdnfP48540 Gm9176-201ENSMUST00000219955 1120 ntBASIC9.85□□□□□ -0.83
GdnfP48540 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
GdnfP48540 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC9.85□□□□□ -0.83
GdnfP48540 AC129597.1-201ENSMUST00000223046 1234 ntBASIC9.85□□□□□ -0.83
GdnfP48540 CT030182.1-201ENSMUST00000225935 533 ntBASIC9.85□□□□□ -0.83
GdnfP48540 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
GdnfP48540 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
GdnfP48540 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
GdnfP48540 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
GdnfP48540 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
GdnfP48540 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.85□□□□□ -0.83
GdnfP48540 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
GdnfP48540 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
GdnfP48540 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.85□□□□□ -0.83
GdnfP48540 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
GdnfP48540 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC9.85□□□□□ -0.83
GdnfP48540 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
GdnfP48540 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
GdnfP48540 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
GdnfP48540 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
GdnfP48540 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
GdnfP48540 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
GdnfP48540 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
GdnfP48540 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
GdnfP48540 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.85□□□□□ -0.83
GdnfP48540 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
GdnfP48540 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
GdnfP48540 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
GdnfP48540 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC9.85□□□□□ -0.83
GdnfP48540 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
GdnfP48540 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.85□□□□□ -0.83
GdnfP48540 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC9.84□□□□□ -0.83
GdnfP48540 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
GdnfP48540 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
GdnfP48540 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.84□□□□□ -0.83
GdnfP48540 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
GdnfP48540 Spata33-207ENSMUST00000212760 4074 ntBASIC9.84□□□□□ -0.83
GdnfP48540 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
GdnfP48540 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC9.84□□□□□ -0.83
GdnfP48540 Gm23949-201ENSMUST00000104027 127 ntBASIC9.84□□□□□ -0.83
GdnfP48540 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC9.84□□□□□ -0.83
GdnfP48540 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC9.84□□□□□ -0.83
GdnfP48540 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.84□□□□□ -0.83
GdnfP48540 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Gm9192-201ENSMUST00000183221 985 ntBASIC9.84□□□□□ -0.83
GdnfP48540 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
GdnfP48540 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC9.84□□□□□ -0.83
GdnfP48540 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC9.84□□□□□ -0.83
GdnfP48540 Gm19212-201ENSMUST00000216642 862 ntBASIC9.84□□□□□ -0.83
GdnfP48540 Zmym2-202ENSMUST00000223669 1281 ntBASIC9.84□□□□□ -0.83
GdnfP48540 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
GdnfP48540 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
GdnfP48540 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
GdnfP48540 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
GdnfP48540 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms