Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmga1P17095 Gm5453-201ENSMUST00000080866 447 ntBASIC11.34□□□□□ -0.59
Hmga1P17095 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Hmga1P17095 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Hmga1P17095 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Hmga1P17095 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hmga1P17095 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Hmga1P17095 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.34□□□□□ -0.59
Hmga1P17095 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmga1P17095 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Hmga1P17095 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Hmga1P17095 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.34□□□□□ -0.59
Hmga1P17095 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hmga1P17095 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmga1P17095 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Hmga1P17095 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Hmga1P17095 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Hmga1P17095 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.33□□□□□ -0.6
Hmga1P17095 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hmga1P17095 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Gm11996-201ENSMUST00000117538 915 ntBASIC11.33□□□□□ -0.6
Hmga1P17095 Gm13039-201ENSMUST00000118638 794 ntBASIC11.33□□□□□ -0.6
Hmga1P17095 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Gm5257-201ENSMUST00000121823 790 ntBASIC11.33□□□□□ -0.6
Hmga1P17095 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Gm24074-201ENSMUST00000158178 260 ntBASIC11.33□□□□□ -0.6
Hmga1P17095 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Gm9162-201ENSMUST00000182081 991 ntBASIC11.33□□□□□ -0.6
Hmga1P17095 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.33□□□□□ -0.6
Hmga1P17095 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Gm40414-201ENSMUST00000197608 481 ntBASIC11.33□□□□□ -0.6
Hmga1P17095 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Hmga1P17095 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.33□□□□□ -0.6
Hmga1P17095 Gm18204-201ENSMUST00000209835 793 ntBASIC11.33□□□□□ -0.6
Hmga1P17095 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hmga1P17095 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.33□□□□□ -0.6
Hmga1P17095 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.33□□□□□ -0.6
Hmga1P17095 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Hmga1P17095 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hmga1P17095 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.33□□□□□ -0.6
Hmga1P17095 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC11.33□□□□□ -0.6
Hmga1P17095 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.33□□□□□ -0.6
Hmga1P17095 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.33□□□□□ -0.6
Hmga1P17095 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.33□□□□□ -0.6
Hmga1P17095 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.33□□□□□ -0.6
Hmga1P17095 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga1P17095 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga1P17095 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Hmga1P17095 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hmga1P17095 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga1P17095 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hmga1P17095 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.32□□□□□ -0.6
Hmga1P17095 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hmga1P17095 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga1P17095 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga1P17095 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.32□□□□□ -0.6
Hmga1P17095 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.32□□□□□ -0.6
Hmga1P17095 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.32□□□□□ -0.6
Hmga1P17095 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga1P17095 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga1P17095 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC11.32□□□□□ -0.6
Hmga1P17095 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.32□□□□□ -0.6
Hmga1P17095 Gm44605-201ENSMUST00000206892 949 ntBASIC11.32□□□□□ -0.6
Hmga1P17095 Gm18042-201ENSMUST00000219887 790 ntBASIC11.32□□□□□ -0.6
Hmga1P17095 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.32□□□□□ -0.6
Hmga1P17095 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga1P17095 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga1P17095 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga1P17095 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hmga1P17095 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga1P17095 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga1P17095 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga1P17095 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms