Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc9P09633 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc9P09633 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hoxc9P09633 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc9P09633 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc9P09633 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc9P09633 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc9P09633 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc9P09633 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hoxc9P09633 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc9P09633 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc9P09633 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hoxc9P09633 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc9P09633 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxc9P09633 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Gm24933-201ENSMUST00000103762 110 ntBASIC14.35□□□□□ -0.11
Hoxc9P09633 Gm23252-201ENSMUST00000103776 110 ntBASIC14.35□□□□□ -0.11
Hoxc9P09633 Gm22495-201ENSMUST00000104492 126 ntBASIC14.35□□□□□ -0.11
Hoxc9P09633 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC14.35□□□□□ -0.11
Hoxc9P09633 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC14.35□□□□□ -0.11
Hoxc9P09633 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Hoxc9P09633 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc9P09633 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC14.35□□□□□ -0.11
Hoxc9P09633 Gm24078-201ENSMUST00000158184 103 ntBASIC14.35□□□□□ -0.11
Hoxc9P09633 Gm26443-201ENSMUST00000179610 110 ntBASIC14.35□□□□□ -0.11
Hoxc9P09633 Gm6291-201ENSMUST00000179994 309 ntBASIC14.35□□□□□ -0.11
Hoxc9P09633 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC14.35□□□□□ -0.11
Hoxc9P09633 Mir8111-201ENSMUST00000184463 137 ntBASIC14.35□□□□□ -0.11
Hoxc9P09633 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC14.35□□□□□ -0.11
Hoxc9P09633 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Gm5302-201ENSMUST00000202130 796 ntBASIC14.35□□□□□ -0.11
Hoxc9P09633 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Rps3a2-201ENSMUST00000074245 792 ntBASIC14.35□□□□□ -0.11
Hoxc9P09633 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hoxc9P09633 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc9P09633 Gm17836-201ENSMUST00000191976 1302 ntBASIC14.35□□□□□ -0.11
Hoxc9P09633 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hoxc9P09633 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc9P09633 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Hoxc9P09633 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxc9P09633 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Gm43984-201ENSMUST00000204572 2864 ntBASIC14.34□□□□□ -0.11
Hoxc9P09633 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc9P09633 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Gm43482-201ENSMUST00000202797 1861 ntBASIC14.34□□□□□ -0.11
Hoxc9P09633 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc9P09633 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc9P09633 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc9P09633 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxc9P09633 Gm12028-201ENSMUST00000118065 436 ntBASIC14.34□□□□□ -0.11
Hoxc9P09633 Gm15707-201ENSMUST00000118804 996 ntBASIC14.34□□□□□ -0.11
Hoxc9P09633 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxc9P09633 Gm16441-201ENSMUST00000138176 924 ntBASIC14.34□□□□□ -0.11
Hoxc9P09633 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxc9P09633 Gm6038-201ENSMUST00000154310 948 ntBASIC14.34□□□□□ -0.11
Hoxc9P09633 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc9P09633 Gm5244-201ENSMUST00000164001 339 ntBASIC14.34□□□□□ -0.11
Hoxc9P09633 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hoxc9P09633 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Gm6518-201ENSMUST00000208450 342 ntBASIC14.34□□□□□ -0.11
Hoxc9P09633 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Gm4930-201ENSMUST00000219926 1087 ntBASIC14.34□□□□□ -0.11
Hoxc9P09633 CT025603.1-201ENSMUST00000224040 448 ntBASIC14.34□□□□□ -0.11
Hoxc9P09633 AC105408.1-201ENSMUST00000227771 802 ntBASIC14.34□□□□□ -0.11
Hoxc9P09633 Rps3a3-201ENSMUST00000074680 795 ntBASIC14.34□□□□□ -0.11
Hoxc9P09633 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hoxc9P09633 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxc9P09633 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxc9P09633 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms