Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Igh-VJ558P01758 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Igh-VJ558P01758 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Igh-VJ558P01758 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Igh-VJ558P01758 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Snord55-201ENSMUST00000174939 79 ntBASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Hyal2-206ENSMUST00000195681 2968 ntBASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Gm43163-201ENSMUST00000196571 442 ntBASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Gm9645-201ENSMUST00000197131 792 ntBASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Gm17213-201ENSMUST00000165161 1360 ntBASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Gm5308-201ENSMUST00000196752 1354 ntBASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Igh-VJ558P01758 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Gm6655-201ENSMUST00000201932 1309 ntBASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Gm13611-201ENSMUST00000118269 318 ntBASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Gm12136-201ENSMUST00000120460 1209 ntBASIC9.59□□□□□ -0.87
Igh-VJ558P01758 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Gm7255-201ENSMUST00000187371 908 ntBASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Gm44100-201ENSMUST00000204329 436 ntBASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Gm9132-201ENSMUST00000210182 832 ntBASIC9.59□□□□□ -0.87
Igh-VJ558P01758 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 AC154461.3-201ENSMUST00000224831 573 ntBASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms