Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Gm11949-201ENSMUST00000117640 372 ntBASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Gm3551-201ENSMUST00000190750 664 ntBASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Gm43916-201ENSMUST00000205062 967 ntBASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 AC154257.1-202ENSMUST00000224729 843 ntBASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Gm43152-201ENSMUST00000202495 1638 ntBASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4bQ9D8B3 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Gm14942-201ENSMUST00000119642 336 ntBASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Gm15881-201ENSMUST00000148792 942 ntBASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Gm19046-201ENSMUST00000221263 1298 ntBASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4bQ9D8B3 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Gm9244-201ENSMUST00000056767 2129 ntBASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Gm10051-201ENSMUST00000145209 414 ntBASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Gm28032-201ENSMUST00000184104 96 ntBASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Gm37466-201ENSMUST00000195692 652 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms