Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Gm12899-201ENSMUST00000120565 551 ntBASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Gm17877-201ENSMUST00000192578 814 ntBASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Gm37028-201ENSMUST00000194276 107 ntBASIC12.53□□□□□ -0.4
Smc1aQ9CU62 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Gm2875-201ENSMUST00000211333 360 ntBASIC12.53□□□□□ -0.4
Smc1aQ9CU62 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smc1aQ9CU62 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Smc1aQ9CU62 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smc1aQ9CU62 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.52□□□□□ -0.4
Smc1aQ9CU62 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smc1aQ9CU62 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.52□□□□□ -0.4
Smc1aQ9CU62 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smc1aQ9CU62 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smc1aQ9CU62 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Gm11836-201ENSMUST00000121022 441 ntBASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Gm9136-201ENSMUST00000193368 454 ntBASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Gm6867-201ENSMUST00000219165 425 ntBASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smc1aQ9CU62 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Smc1aQ9CU62 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.51□□□□□ -0.41
Smc1aQ9CU62 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smc1aQ9CU62 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smc1aQ9CU62 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Smc1aQ9CU62 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smc1aQ9CU62 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smc1aQ9CU62 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smc1aQ9CU62 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smc1aQ9CU62 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smc1aQ9CU62 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms