Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Gm5171-201ENSMUST00000214944 1415 ntBASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Gm12247-201ENSMUST00000117585 670 ntBASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Gm25881-201ENSMUST00000157783 103 ntBASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Ighv1-62-201ENSMUST00000193406 350 ntBASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Gm9678-201ENSMUST00000198979 1149 ntBASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Gm43630-201ENSMUST00000201550 776 ntBASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Gm6082-201ENSMUST00000215204 454 ntBASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Gm10417-201ENSMUST00000194341 3522 ntBASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nhlrc3Q8CCH2 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Gm15198-201ENSMUST00000117283 177 ntBASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Gm13916-201ENSMUST00000117368 628 ntBASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Gm12579-201ENSMUST00000118040 783 ntBASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Gm11573-201ENSMUST00000119956 394 ntBASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Gm13263-201ENSMUST00000121271 838 ntBASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Gm6039-201ENSMUST00000121667 1250 ntBASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 AC107638.1-201ENSMUST00000213690 1061 ntBASIC9.41□□□□□ -0.9
Nhlrc3Q8CCH2 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms