Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Gm37447-201ENSMUST00000195625 2928 ntBASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm14058-201ENSMUST00000116082 735 ntBASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm11450-201ENSMUST00000121144 333 ntBASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm25492-201ENSMUST00000157383 129 ntBASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm37284-201ENSMUST00000193607 539 ntBASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm6905-201ENSMUST00000205729 511 ntBASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm18212-201ENSMUST00000211678 889 ntBASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm5369-201ENSMUST00000217499 588 ntBASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 AC108416.1-201ENSMUST00000228755 1558 ntBASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Gm24992-201ENSMUST00000157412 130 ntBASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Gm27552-201ENSMUST00000183351 62 ntBASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Gm27844-201ENSMUST00000183613 62 ntBASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rad54bQ6PFE3 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms