Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Gm17208-201ENSMUST00000168388 535 ntBASIC9.12□□□□□ -0.95
Trim63Q38HM4 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Trim63Q38HM4 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC9.12□□□□□ -0.95
Trim63Q38HM4 Gm7390-201ENSMUST00000212452 1216 ntBASIC9.12□□□□□ -0.95
Trim63Q38HM4 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Gm24526-201ENSMUST00000082921 158 ntBASIC9.12□□□□□ -0.95
Trim63Q38HM4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Ube2q1-202ENSMUST00000196726 1650 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Samsn1-201ENSMUST00000114239 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Dpf2-205ENSMUST00000136983 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Zfp114-201ENSMUST00000086010 3332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Emc1-205ENSMUST00000179784 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Emc1-202ENSMUST00000082262 6226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Pcdhb6-201ENSMUST00000061717 3729 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Lima1-202ENSMUST00000109024 4109 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Gm38043-201ENSMUST00000195501 5141 ntBASIC9.12□□□□□ -0.95
Trim63Q38HM4 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Tmprss13-201ENSMUST00000034597 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Bcas1-203ENSMUST00000109152 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Pwp1-201ENSMUST00000001836 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 AC108416.1-201ENSMUST00000228755 1558 ntBASIC9.12□□□□□ -0.95
Trim63Q38HM4 Timeless-205ENSMUST00000105244 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC9.12□□□□□ -0.95
Trim63Q38HM4 Sgo2b-201ENSMUST00000179944 3739 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Ssrp1-209ENSMUST00000168266 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Zbtb37-205ENSMUST00000171748 2141 ntTSL 5 BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Mcf2-202ENSMUST00000063507 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Cyfip2-201ENSMUST00000093165 6604 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trim63Q38HM4 AC168276.1-201ENSMUST00000218963 2385 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Gm15610-201ENSMUST00000120584 195 ntBASIC9.11□□□□□ -0.95
Trim63Q38HM4 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC9.11□□□□□ -0.95
Trim63Q38HM4 Gm43474-201ENSMUST00000196415 774 ntBASIC9.11□□□□□ -0.95
Trim63Q38HM4 Gm44335-201ENSMUST00000196879 141 ntBASIC9.11□□□□□ -0.95
Trim63Q38HM4 Gm44346-201ENSMUST00000198851 141 ntBASIC9.11□□□□□ -0.95
Trim63Q38HM4 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.11□□□□□ -0.95
Trim63Q38HM4 Gm44772-201ENSMUST00000207623 1191 ntBASIC9.11□□□□□ -0.95
Trim63Q38HM4 AC132104.2-201ENSMUST00000215011 266 ntBASIC9.11□□□□□ -0.95
Trim63Q38HM4 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.11□□□□□ -0.95
Trim63Q38HM4 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.11□□□□□ -0.95
Trim63Q38HM4 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trim63Q38HM4 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC9.11□□□□□ -0.95
Trim63Q38HM4 Sfi1-210ENSMUST00000140846 3604 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 4931406P16Rik-201ENSMUST00000085592 5798 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Cdk20-201ENSMUST00000021939 4118 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Phf8-201ENSMUST00000046950 5728 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Bco2-201ENSMUST00000119103 2118 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Gm44198-201ENSMUST00000203063 2636 ntBASIC9.11□□□□□ -0.95
Trim63Q38HM4 Gm44153-201ENSMUST00000204162 1580 ntBASIC9.11□□□□□ -0.95
Trim63Q38HM4 AC132467.2-201ENSMUST00000226306 2253 ntBASIC9.11□□□□□ -0.95
Trim63Q38HM4 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Mcm10-202ENSMUST00000102985 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trim63Q38HM4 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 AC133598.5-201ENSMUST00000224937 1517 ntBASIC9.1□□□□□ -0.95
Trim63Q38HM4 Vash2-202ENSMUST00000166139 3897 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 AC154355.1-201ENSMUST00000224604 2162 ntBASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trim63Q38HM4 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms