Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.13□□□□□ -0.47
SSBP1Q04837 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SSBP1Q04837 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.13□□□□□ -0.47
SSBP1Q04837 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
SSBP1Q04837 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.13□□□□□ -0.47
SSBP1Q04837 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SSBP1Q04837 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
SSBP1Q04837 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.13□□□□□ -0.47
SSBP1Q04837 AC100757.3-201ENST00000622361 1406 ntBASIC12.13□□□□□ -0.47
SSBP1Q04837 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.13□□□□□ -0.47
SSBP1Q04837 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.13□□□□□ -0.47
SSBP1Q04837 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.13□□□□□ -0.47
SSBP1Q04837 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.13□□□□□ -0.47
SSBP1Q04837 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.13□□□□□ -0.47
SSBP1Q04837 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.13□□□□□ -0.47
SSBP1Q04837 RN7SKP175-201ENST00000408472 289 ntBASIC12.13□□□□□ -0.47
SSBP1Q04837 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 HMGA1P1-201ENST00000415560 1062 ntBASIC12.13□□□□□ -0.47
SSBP1Q04837 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.13□□□□□ -0.47
SSBP1Q04837 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.13□□□□□ -0.47
SSBP1Q04837 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.13□□□□□ -0.47
SSBP1Q04837 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.13□□□□□ -0.47
SSBP1Q04837 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SSBP1Q04837 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.13□□□□□ -0.47
SSBP1Q04837 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.13□□□□□ -0.47
SSBP1Q04837 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.13□□□□□ -0.47
SSBP1Q04837 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.13□□□□□ -0.47
SSBP1Q04837 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.13□□□□□ -0.47
SSBP1Q04837 AL590560.3-201ENST00000623350 461 ntBASIC12.13□□□□□ -0.47
SSBP1Q04837 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.13□□□□□ -0.47
SSBP1Q04837 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.13□□□□□ -0.47
SSBP1Q04837 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SSBP1Q04837 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.13□□□□□ -0.47
SSBP1Q04837 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SSBP1Q04837 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP1Q04837 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.12□□□□□ -0.47
SSBP1Q04837 AL590824.1-201ENST00000403828 1349 ntBASIC12.12□□□□□ -0.47
SSBP1Q04837 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SSBP1Q04837 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.12□□□□□ -0.47
SSBP1Q04837 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.12□□□□□ -0.47
SSBP1Q04837 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.12□□□□□ -0.47
SSBP1Q04837 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.12□□□□□ -0.47
SSBP1Q04837 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.12□□□□□ -0.47
SSBP1Q04837 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 POM121L8P-201ENST00000417732 1281 ntBASIC12.12□□□□□ -0.47
SSBP1Q04837 POM121L9P-203ENST00000441984 1285 ntBASIC12.12□□□□□ -0.47
SSBP1Q04837 KLF2P3-201ENST00000451977 1087 ntBASIC12.12□□□□□ -0.47
SSBP1Q04837 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.12□□□□□ -0.47
SSBP1Q04837 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.12□□□□□ -0.47
SSBP1Q04837 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.12□□□□□ -0.47
SSBP1Q04837 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.12□□□□□ -0.47
SSBP1Q04837 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.12□□□□□ -0.47
SSBP1Q04837 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.12□□□□□ -0.47
SSBP1Q04837 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
SSBP1Q04837 AC015911.4-201ENST00000588022 1070 ntBASIC12.12□□□□□ -0.47
SSBP1Q04837 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.12□□□□□ -0.47
SSBP1Q04837 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.12□□□□□ -0.47
SSBP1Q04837 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.12□□□□□ -0.47
SSBP1Q04837 FP325330.2-201ENST00000624219 5630 ntBASIC12.12□□□□□ -0.47
SSBP1Q04837 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SSBP1Q04837 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
SSBP1Q04837 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.12□□□□□ -0.47
SSBP1Q04837 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.12□□□□□ -0.47
SSBP1Q04837 VENTXP1-201ENST00000569334 2716 ntBASIC12.12□□□□□ -0.47
SSBP1Q04837 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms