Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-3P97334 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Gm38192-201ENSMUST00000194364 1847 ntBASIC13.99□□□□□ -0.17
Nkx2-3P97334 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 BC043934-202ENSMUST00000185694 2356 ntBASIC13.99□□□□□ -0.17
Nkx2-3P97334 Gm15074-201ENSMUST00000117603 936 ntBASIC13.99□□□□□ -0.17
Nkx2-3P97334 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Gm7069-201ENSMUST00000182418 1008 ntBASIC13.99□□□□□ -0.17
Nkx2-3P97334 Gm8234-201ENSMUST00000198523 1107 ntBASIC13.99□□□□□ -0.17
Nkx2-3P97334 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC13.99□□□□□ -0.17
Nkx2-3P97334 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-3P97334 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Gm7964-201ENSMUST00000051522 1378 ntBASIC13.98□□□□□ -0.17
Nkx2-3P97334 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 AC151836.1-201ENSMUST00000228730 1637 ntBASIC13.98□□□□□ -0.17
Nkx2-3P97334 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Gm13094-201ENSMUST00000117930 409 ntBASIC13.98□□□□□ -0.17
Nkx2-3P97334 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Mipep-ps-201ENSMUST00000177439 291 ntBASIC13.98□□□□□ -0.17
Nkx2-3P97334 Gm7445-201ENSMUST00000192115 340 ntBASIC13.98□□□□□ -0.17
Nkx2-3P97334 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Gm44640-201ENSMUST00000206894 247 ntBASIC13.98□□□□□ -0.17
Nkx2-3P97334 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Gm3318-201ENSMUST00000217604 1183 ntBASIC13.98□□□□□ -0.17
Nkx2-3P97334 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-3P97334 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-3P97334 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-3P97334 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-3P97334 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-3P97334 AC149588.2-201ENSMUST00000228182 1859 ntBASIC13.97□□□□□ -0.17
Nkx2-3P97334 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-3P97334 AC122273.1-201ENSMUST00000213634 2327 ntBASIC13.97□□□□□ -0.17
Nkx2-3P97334 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Nkx2-3P97334 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-3P97334 Gm21939-201ENSMUST00000221137 2773 ntBASIC13.97□□□□□ -0.17
Nkx2-3P97334 Gfra2-203ENSMUST00000227697 1323 ntBASIC13.97□□□□□ -0.17
Nkx2-3P97334 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Nkx2-3P97334 Gm12463-201ENSMUST00000118271 849 ntBASIC13.97□□□□□ -0.17
Nkx2-3P97334 Gm6441-201ENSMUST00000120983 696 ntBASIC13.97□□□□□ -0.17
Nkx2-3P97334 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nkx2-3P97334 Gm14363-201ENSMUST00000122304 409 ntBASIC13.97□□□□□ -0.17
Nkx2-3P97334 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC13.97□□□□□ -0.17
Nkx2-3P97334 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC13.97□□□□□ -0.17
Nkx2-3P97334 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC13.97□□□□□ -0.17
Nkx2-3P97334 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC13.97□□□□□ -0.17
Nkx2-3P97334 Gm8384-201ENSMUST00000190905 704 ntBASIC13.97□□□□□ -0.17
Nkx2-3P97334 Gm37293-201ENSMUST00000191658 295 ntBASIC13.97□□□□□ -0.17
Nkx2-3P97334 Gm43097-201ENSMUST00000196867 151 ntBASIC13.97□□□□□ -0.17
Nkx2-3P97334 Wbp1-209ENSMUST00000205023 716 ntBASIC13.97□□□□□ -0.17
Nkx2-3P97334 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms