Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Atf1P81269 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Atf1P81269 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Atf1P81269 AC166836.1-201ENSMUST00000219933 1795 ntBASIC9.65□□□□□ -0.87
Atf1P81269 AC124732.3-201ENSMUST00000221835 1765 ntBASIC9.65□□□□□ -0.87
Atf1P81269 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Atf1P81269 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Atf1P81269 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Atf1P81269 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Atf1P81269 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Atf1P81269 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Atf1P81269 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Atf1P81269 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Atf1P81269 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Atf1P81269 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.64□□□□□ -0.87
Atf1P81269 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.64□□□□□ -0.87
Atf1P81269 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC9.64□□□□□ -0.87
Atf1P81269 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.64□□□□□ -0.87
Atf1P81269 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC9.64□□□□□ -0.87
Atf1P81269 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Atf1P81269 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.64□□□□□ -0.87
Atf1P81269 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Gm16219-201ENSMUST00000120096 274 ntBASIC9.64□□□□□ -0.87
Atf1P81269 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC9.64□□□□□ -0.87
Atf1P81269 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Atf1P81269 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Gm29067-201ENSMUST00000190821 470 ntBASIC9.64□□□□□ -0.87
Atf1P81269 Gm44136-201ENSMUST00000203819 1106 ntBASIC9.64□□□□□ -0.87
Atf1P81269 AC122408.1-201ENSMUST00000218949 218 ntBASIC9.64□□□□□ -0.87
Atf1P81269 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Atf1P81269 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Atf1P81269 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Atf1P81269 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.64□□□□□ -0.87
Atf1P81269 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.64□□□□□ -0.87
Atf1P81269 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC9.64□□□□□ -0.87
Atf1P81269 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Atf1P81269 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Atf1P81269 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Atf1P81269 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Atf1P81269 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Atf1P81269 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.63□□□□□ -0.87
Atf1P81269 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Atf1P81269 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Atf1P81269 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Atf1P81269 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Atf1P81269 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Atf1P81269 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Atf1P81269 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Atf1P81269 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Atf1P81269 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Atf1P81269 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Atf1P81269 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.63□□□□□ -0.87
Atf1P81269 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Atf1P81269 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.63□□□□□ -0.87
Atf1P81269 Gm15352-201ENSMUST00000118696 270 ntBASIC9.63□□□□□ -0.87
Atf1P81269 Gm15615-201ENSMUST00000118876 198 ntBASIC9.63□□□□□ -0.87
Atf1P81269 Gm8302-201ENSMUST00000119217 852 ntBASIC9.63□□□□□ -0.87
Atf1P81269 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC9.63□□□□□ -0.87
Atf1P81269 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC9.63□□□□□ -0.87
Atf1P81269 Gm13328-201ENSMUST00000120816 1020 ntBASIC9.63□□□□□ -0.87
Atf1P81269 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Atf1P81269 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC9.63□□□□□ -0.87
Atf1P81269 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.63□□□□□ -0.87
Atf1P81269 Saa-ps-201ENSMUST00000211148 320 ntBASIC9.63□□□□□ -0.87
Atf1P81269 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Atf1P81269 Gm9257-201ENSMUST00000221254 232 ntBASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms